Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g2678 ATGAATTGTCTTCGGAATCTTCCTTTATCCTCCGGTTTGCCTTTCCAAAGCTTTAGAAGCCACCAAAGGAAGCCCCTCTGCCCTGCCAATTCACTTGGAATGGCCAACACATGTGATACAAATCGAACTATGGCAGTGAAGTCTGCTTCTGGTTCTATGTCCAGTGCAGAGATGGATAGTGCCAACATGAAAGAGGAAAAGTCTGAGACATATAGTCATAACATGACAGAAGCCATGGGTGCTGTTTTGACTTATAGGCATGAACTGGGTATGAACTACAACTTCATCCGTCTGGACCTAATTGTGGGATCATGCCTACAGACTCCTGAAGATGTTGACAAGCTTCGTGCAATAGGAGTGAAAACTATATTTTGCCTGCAACAAGATCCAGACCTAGAATATTTTGGAGTTGATATCAATGCTATACGAGAATATGCCAAGTCTTGCAATGACATTCAACACTTGCGTGCTGAGATAAGGGACTTTGATGCATTTGATTTACGGATGAGGCTTCCAGATGTAGTTAGCAAATTGTACAAGGCAATAAATCGCAATGGGGGTGTGACATATATACATTGCACTGCTGGACTTGGAAGAGCACCAGCTGTTGCGTTGGCATATATGTTTTGGGTTCAGGGTTATAAACTTGATGAGGCTACCAGATTGCTCCTGAGCAAAAGATCTTGCTTCCCAAAATTGGATGGGATAAAAAGTGCAACAGCCGATATACTTACAGGCCTTAGTAAAAAGCTTGTCACCCTGACGTGGAAAGACATCAATTGCTCTTCGGTTGAAATTTCTGGACTTGATATTGGATGGGGCCAGAGGATGCCCCTGCAATTTGACGACAAACAGGGTTTGTGGTTTCTCAAGAGGGAATTGCCTGAAGGACGATACGAGTACAAGTACATTATTGATGGGGAATGGACATGCAATAAATATGAGCTCGTAACCTCTCCCAACAAAGATGGTCATGTCAATAATTTTCTGCAAGTTGCTGACGATACAAGCAGTTTTAATGCCTCCATAAGGAAGAGGCTGACCGGTGATGATCCTGATCTCACAAAGGAGGAACGGCTGAAGATAAGACAGTTTCTTGAGGCCTATCCTGATGAAGAACAACATTGA 1128 0.4317 MNCLRNLPLSSGLPFQSFRSHQRKPLCPANSLGMANTCDTNRTMAVKSASGSMSSAEMDSANMKEEKSETYSHNMTEAMGAVLTYRHELGMNYNFIRLDLIVGSCLQTPEDVDKLRAIGVKTIFCLQQDPDLEYFGVDINAIREYAKSCNDIQHLRAEIRDFDAFDLRMRLPDVVSKLYKAINRNGGVTYIHCTAGLGRAPAVALAYMFWVQGYKLDEATRLLLSKRSCFPKLDGIKSATADILTGLSKKLVTLTWKDINCSSVEISGLDIGWGQRMPLQFDDKQGLWFLKRELPEGRYEYKYIIDGEWTCNKYELVTSPNKDGHVNNFLQVADDTSSFNASIRKRLTGDDPDLTKEERLKIRQFLEAYPDEEQH 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g2678 375 Gene3D Protein tyrosine phosphatase superfamily 85 365 IPR029021 -
Bisa03g2678 375 PANTHER DUAL SPECIFICITY PHOSPHATASE, SUBGROUP, CATALYTIC DOMAIN 14 372 - -
Bisa03g2678 375 Pfam Dual specificity phosphatase, catalytic domain 135 230 IPR000340 GO:0008138|GO:0016311
Bisa03g2678 375 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 90 232 IPR029021 -
Bisa03g2678 375 ProSiteProfiles Dual specificity protein phosphatase domain profile. 92 249 IPR020422 GO:0006470|GO:0008138
Bisa03g2678 375 FunFam Phosphoglucan phosphatase DSP4, chloroplastic 85 265 - -
Bisa03g2678 375 FunFam Phosphoglucan phosphatase DSP4, chloroplastic 247 337 - -
Bisa03g2678 375 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 169 227 IPR000387 GO:0016311|GO:0016791
Bisa03g2678 375 SUPERFAMILY E set domains 251 333 IPR014756 -
Bisa03g2678 375 CDD DSP_laforin-like 91 238 IPR045204 GO:0019203
Bisa03g2678 375 Gene3D Immunoglobulins 247 337 IPR013783 -
Bisa03g2678 375 CDD E_set_AMPKbeta_like_N 252 332 - -
Bisa03g2678 375 SMART dsp_5 92 242 IPR020422 GO:0006470|GO:0008138
Bisa03g2678 375 Pfam Glycogen recognition site of AMP-activated protein kinase 252 335 IPR032640 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g2678 Bisa-ChrBisa03 41553684 41564788 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g2678 91 373 Protein tyrosine phosphatase (PTP) family AT3G52180 72.085 3.10e-154 434