Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g2674 ATGATGTATACTTTGAATTTGTTTGATAAACCAAATGGGGTTAGGTTTAATGATGTACTTCCTTTGGTGCCTCTCTCAGCTAAGTTTCTTGCAAAGATGGGTAGGGGACAGGACAATGACCCTATTGAAAGTGTCAAGCCTTCCACTGAACAGGATATTTCTAATGAGTTAGATCTGAAAATAAAGAAATATCTCAGAGGAGATGGTGCAAATTTGGAGGTTTTGAAAGATAAAAAACTTAAGGGTCAACTTTCTGCTAGAGAGGACTTATATAGCAAATCAGCGAAAGTTGCTGCCAAGGCTGATAAGTGGCTTGTGCCCAGTGAGGGAGGCTTTCTGGAGGCTGAAGGCATAGAGAAGACATGGAGGATCAAACAGGAGGCAATAGCTAAAGAAGTAGATATCTTAAGCTTGAGGAAGCAATTTGATATTGTTTTACCAGAACTTGGTCCATACACTTTGGATTTTACTTCAAGTGGCCGGTATATGGCTGTTGGAGGGCGCAAGGGTCACCTGGGAATTGTAGACATGTTGAGTATGAGCCTAATAAAAGAGTTTCAGGTTAGAGAAACAGTGCGTGATGTGGCATTCTTGCATAATGAGCTGTTTTTTGCTGCTGCCCAGAAAAAGTATCCTTACATCTATAACCGTGATGGAACTGAGCTTCACTGCCTCAAGGAACATGGTGCAGTGTTAAGGCTTCAATTTCTAAAAAACCACTTTCTCTTGGCTTCAATAAACAAATTTGGTCAGCTTCATTATCAGGATGTCACAACAGGTGCCATGGTTGGTAATATTCGAACTGGTTTGGGTCGTACTAATGTGATGCAAGTGAACCCCTTCAATGGGGTTGTTGCTTTGGGTCATTCAGGCGGTACTGTCACAATGTGGAAGCCTACAAGCTCAGCTCCTCTTGTCAAGATGCTGTGTCATCATGGTCCTCTCTCAGCTATGGCATTTCACTCAAATGGCCACTTAATGGCCACTGCTGGGAAAGACAAAAAGATTAAGCTTTGGGACTTGAGGAAATTTGAGGTTCTTAAGACATTACCAGGCCATGCAAACACTTTGGATTTTAGTCAAAAGGGCTTGCTTGCTTGTGGGATTGGATCATTTGTACGGGTTCTAGGTGATCTTTCTGGTTCGCAGAATTATTCCAGGTATATGACTCATTCCATGGTTAAAGGTTACCAGATTGGAAAGTTAATATTTCGACCATATGAAGATGTTCTCGGCATAGGGCACTCCATGGGTTGGTCCAGTATTCTTATTCCGGGATCAGGAGAACCCAACTTTGACTCATGGGTGGCCAATCCATTTGAAACATCTAAACAGAGGAGAGAGAAGGAAGTTCGCACTCTTCTTGATAAGCTGCCTCCAGAGACAATCATGTTGGACCCAACCAAAATTGGTACGGTAAAACCAGCTAAGAAAGAGAAGCCATTAAAGGAGAGGGAGGCTGAGATAGAAGCTGCTGTTGAAGCTGTCAAGGACTTGAAAATGAAGAAGAAAACAAAAGGAAGAAATAAGCCAAGCAAGAAGTTGAAGAAAAGGCAGGAGGCAATTGAGAGAGCCAAGAGGCCCTACTTGGAAGAAAAAATTAGAGAGGAAGAAATATCCAGAAAGAAGCAGAAAGTTGGTGAGGAAGTTCGTTTACCGAAATCCTTAGAAAGATTTGCTGGTAAAAAACCAGCATCATGA 1701 0.4209 MMYTLNLFDKPNGVRFNDVLPLVPLSAKFLAKMGRGQDNDPIESVKPSTEQDISNELDLKIKKYLRGDGANLEVLKDKKLKGQLSAREDLYSKSAKVAAKADKWLVPSEGGFLEAEGIEKTWRIKQEAIAKEVDILSLRKQFDIVLPELGPYTLDFTSSGRYMAVGGRKGHLGIVDMLSMSLIKEFQVRETVRDVAFLHNELFFAAAQKKYPYIYNRDGTELHCLKEHGAVLRLQFLKNHFLLASINKFGQLHYQDVTTGAMVGNIRTGLGRTNVMQVNPFNGVVALGHSGGTVTMWKPTSSAPLVKMLCHHGPLSAMAFHSNGHLMATAGKDKKIKLWDLRKFEVLKTLPGHANTLDFSQKGLLACGIGSFVRVLGDLSGSQNYSRYMTHSMVKGYQIGKLIFRPYEDVLGIGHSMGWSSILIPGSGEPNFDSWVANPFETSKQRREKEVRTLLDKLPPETIMLDPTKIGTVKPAKKEKPLKEREAEIEAAVEAVKDLKMKKKTKGRNKPSKKLKKRQEAIERAKRPYLEEKIREEEISRKKQKVGEEVRLPKSLERFAGKKPAS 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g2674 566 ProSitePatterns Trp-Asp (WD) repeats signature. 327 341 IPR019775 -
Bisa03g2674 566 ProSiteProfiles Trp-Asp (WD) repeats profile. 308 349 IPR001680 GO:0005515
Bisa03g2674 566 Gene3D - 271 387 IPR015943 GO:0005515
Bisa03g2674 566 SMART WD40_4 259 298 IPR001680 GO:0005515
Bisa03g2674 566 SMART WD40_4 343 377 IPR001680 GO:0005515
Bisa03g2674 566 SMART WD40_4 179 216 IPR001680 GO:0005515
Bisa03g2674 566 SMART WD40_4 137 176 IPR001680 GO:0005515
Bisa03g2674 566 SMART WD40_4 301 340 IPR001680 GO:0005515
Bisa03g2674 566 MobiDBLite consensus disorder prediction 502 566 - -
Bisa03g2674 566 Pfam WD domain, G-beta repeat 309 340 IPR001680 GO:0005515
Bisa03g2674 566 Coils Coil 482 502 - -
Bisa03g2674 566 SMART BING4CT_2 387 467 IPR012952 -
Bisa03g2674 566 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 308 342 - -
Bisa03g2674 566 Pfam BING4CT (NUC141) domain 388 466 IPR012952 -
Bisa03g2674 566 Gene3D - 134 270 IPR015943 GO:0005515
Bisa03g2674 566 PANTHER WD-REPEAT PROTEIN BING4 43 560 IPR040315 -
Bisa03g2674 566 FunFam Os01g0183100 protein 217 411 - -
Bisa03g2674 566 SUPERFAMILY WD40 repeat-like 138 411 IPR036322 GO:0005515
Bisa03g2674 566 MobiDBLite consensus disorder prediction 516 566 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g2674 150 376 U-box Gene Family AT1G04510 24.896 5.06e-12 66.6