Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g2667 ATGTTGGCCATGGAGAAGGATTTTGATTCCAAGTTGAGGGTTCAGGAGAATTCGTCTCATGAAGGGGCTGTGGCTGTGCAGAGATCTAAGAGCTTTGCATTCAGAGCTCCTCAGGAGAATTACACCATCCAGGACTTTGAATTGGGAAAGATCTATGGCGTTGGCTCTTACTCTAAGGTTGTGAGGGCAAGGAAAAAGGACACGGGAGCTGTGTATGCATTGAAGATCATGGATAAAAAATTTATTACTAAAGAGAACAAAACAGCTTATGTGAAGTTGGAACGCATAGTGCTTGATCAATTAGACCATCCTGGCATCGTGCGGCTATTTTTCACATTTCAAGACACATTTTCTATTTACATGGCGCTGGAGTCCTGTGAAGGTGGAGAACTTTTTGATCAAATAACCCGGAAAGGTCGTCTGGCAGAGGATGAAGCACGGTTCTATACAGCTGAAGTTGTGGATGCTCTTGAATACATACATAATTTGGGATTGATACATCGTGATATTAAGCCGGAGAACTTGTTACTTACGGTTGATGGGCATATTAAAATAGCCGATTTTGGGAGTGTAAAACCTATGCAGGACAGTCGGATCACAGTCCTTCCAAATGCAGCAGCATCAGATGATAAAGCCTGCACATTTGTGGGGACGGCTGCTTATGTCCCTCCAGAAGTTCTTAATTCTTCTCCAGCAACTTTTGGAAATGATCTCTGGGCTCTTGGATGCACATTATACCAAATGCTTTCTGGAACTTCTCCTTTTAAAGATGCTAGTGAATGGCTTATCTTCCAAAGAATTATAGCCAGAGATATTCGATTTCCAGATTACTTCTCTGAGGAAGCTAGAGATCTTATTGACCGGTTATTGGATTCAAATCCCATGAGGAGACCAGGGGCAGGACCTGATGGTTATGCTGTTTTGAAAAGTCATCCGTTTTTCAGGGGAGTAGACTGGAATAACATAAGGGAACACAGCCCCCCAAAACTTGTTCCAGAAGCAGGGGATGGTTCAGCCAAACTTGATGGAAATTCTGGTGCCACATCTTCCGATAATTCTCATGTAACCAGGCTAGCTTCAATTGATTCCTTCGATTCAAAATGGCAACAGTTTTTAGAACCTGGGGAATCTGTTATTATGATTTCCATGGTGAAGAAATTACAGAAACTGACAAGTAAGAAGGTGCAGCTCATCCTTACCAACAAGCCAAAGTTGATCTATGTCGACCCATCGAAACTAATTGTAAAGGGAAATATGATATGGTCTGATAATCCAAATGATCTGACTGTCCAAGTGATTAGTCCTTCAAATTTTAAGATTTGCACGCCGAAAAAGGTGATGCAATTTGAAGATGCAAAACAGAGAGCATCCCAGTGGAAGAAGGCAATCGAAGGACTTCAAAACCGGTGA 1410 0.4213 MLAMEKDFDSKLRVQENSSHEGAVAVQRSKSFAFRAPQENYTIQDFELGKIYGVGSYSKVVRARKKDTGAVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGIVRLFFTFQDTFSIYMALESCEGGELFDQITRKGRLAEDEARFYTAEVVDALEYIHNLGLIHRDIKPENLLLTVDGHIKIADFGSVKPMQDSRITVLPNAAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDASEWLIFQRIIARDIRFPDYFSEEARDLIDRLLDSNPMRRPGAGPDGYAVLKSHPFFRGVDWNNIREHSPPKLVPEAGDGSAKLDGNSGATSSDNSHVTRLASIDSFDSKWQQFLEPGESVIMISMVKKLQKLTSKKVQLILTNKPKLIYVDPSKLIVKGNMIWSDNPNDLTVQVISPSNFKICTPKKVMQFEDAKQRASQWKKAIEGLQNR 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g2667 469 ProSiteProfiles Protein kinase domain profile. 46 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa03g2667 469 Pfam Protein kinase domain 48 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa03g2667 469 Gene3D Phosphorylase Kinase; domain 1 44 129 - -
Bisa03g2667 469 FunFam 3-phosphoinositide-dependent protein kinase 2-like 130 329 - -
Bisa03g2667 469 ProSitePatterns Serine/Threonine protein kinases active-site signature. 165 177 IPR008271 GO:0004672|GO:0006468
Bisa03g2667 469 Gene3D Transferase(Phosphotransferase) domain 1 130 333 - -
Bisa03g2667 469 FunFam 3-phosphoinositide-dependent protein kinase 1 341 469 - -
Bisa03g2667 469 SUPERFAMILY Protein kinase-like (PK-like) 30 330 IPR011009 -
Bisa03g2667 469 FunFam 3-phosphoinositide-dependent protein kinase 2-like 44 129 - -
Bisa03g2667 469 MobiDBLite consensus disorder prediction 326 352 - -
Bisa03g2667 469 CDD STKc_PDK1 44 314 IPR039046 GO:0004674
Bisa03g2667 469 SMART serkin_6 46 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa03g2667 469 PANTHER SERINE/THREONINE-PROTEIN KINASE 29 349 - -
Bisa03g2667 469 SUPERFAMILY PH domain-like 308 468 - -
Bisa03g2667 469 Coils Coil 449 469 - -
Bisa03g2667 469 Gene3D - 339 469 IPR011993 -
Bisa03g2667 469 Pfam PH domain 366 468 IPR033931 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g2667 Bisa-ChrBisa03 41275289 41287896 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g2667 1 469 AGC Kinase Gene Family AT3G10540 79.550 0.0 798
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_PDK1 Bisa03g2667 Pkinase 2.9e-64 CL0016