Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g2659 ATGGAGATGGGAAATGGGATATTGGAGGGTAGGCAATGGTGTAACATATGCTGCAACATGGTGAGCCCAATGAATGAAGGTGAGATTAACAAATGCTCCTTATGCGGGACGGAGTTCACAGAGTCAATAGGGAATAATCTAAGAGATAACAACGAAGGCACTGATCTGAGATCAGCCTCTGTGTTCTGTGTCTACGCTCCGATCTTAATGGGGCTGATGAGTGCTTTAGGCCCTGCCCTAGCCACCTCTGCTTCCACCAGCAACAGCAGCAACGACAATAATGGCTCAAGGGAGGAATCAGAAGAGGCTGAACCAGACACAAGACATCACGAGCTTGTGGTTAGCAGAAGGAGAAGAAGAACCTCCACTTCGCTCATGCTCATCTTTCGTCGTCTTCACCACAGGATGGTCTCTGAGACGATTGAGTCTCATCACACCAACCCTGAAACCAACAGAAACAGTATCGACCATAGTAATACTAGCAACAATAATATGAATCTCAGTGTGATTGTTATCGACCCATTCACCGACCAGGCCTTGATTCTGCGAGGTCCTTCTCATATGAACCACGCTAGACCTTCTGCACTGTCCGAGAATCCCGTTGGGTCTCTGGGTGAGTTTCTGCATGGACCTGGGTTTGGCTTGTTACTGCAACACATGGCACAAAACGACACCAACAATAGGTATGTGAATAATGCGAATCCTCCAGCGCAGAGAGCAGCCATTGAAGCGTTACCCATTGTGACCACAGAGGAGAACATGCTGTGCATAATATGCTTGGAGGACACTGAGATTGGGAGTGAAGTGAAGAAGATGCCATGTGAGCATAAGTTTCACAATGACTGCATCGTGTCATGGCTGAAACTCCATAGCTCTTGCCCAGTTTGCAGGTTTCAGATGCCGTTTGATGAGTCCAAGGTTGAGACGACCAGTTTCGAGCGTCCAAACGAAGGAGAGCATCAGCACAATGAAAGGGTTGTGGGTAGAGAAGAGAGAATGCGAGTTGGAAGGAGAAGCTGGCTTTCCATTTTGCAGCCATTTGATTAA 1047 0.4766 MEMGNGILEGRQWCNICCNMVSPMNEGEINKCSLCGTEFTESIGNNLRDNNEGTDLRSASVFCVYAPILMGLMSALGPALATSASTSNSSNDNNGSREESEEAEPDTRHHELVVSRRRRRTSTSLMLIFRRLHHRMVSETIESHHTNPETNRNSIDHSNTSNNNMNLSVIVIDPFTDQALILRGPSHMNHARPSALSENPVGSLGEFLHGPGFGLLLQHMAQNDTNNRYVNNANPPAQRAAIEALPIVTTEENMLCIICLEDTEIGSEVKKMPCEHKFHNDCIVSWLKLHSSCPVCRFQMPFDESKVETTSFERPNEGEHQHNERVVGREERMRVGRRSWLSILQPFD 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g2659 348 MobiDBLite consensus disorder prediction 309 328 - -
Bisa03g2659 348 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 126 301 - -
Bisa03g2659 348 SUPERFAMILY RING/U-box 250 303 - -
Bisa03g2659 348 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 222 303 IPR013083 -
Bisa03g2659 348 MobiDBLite consensus disorder prediction 141 161 - -
Bisa03g2659 348 FunFam E3 ubiquitin-protein ligase RNF181 225 303 - -
Bisa03g2659 348 Pfam Ring finger domain 256 297 IPR001841 -
Bisa03g2659 348 MobiDBLite consensus disorder prediction 95 112 - -
Bisa03g2659 348 MobiDBLite consensus disorder prediction 82 117 - -
Bisa03g2659 348 ProSiteProfiles Zinc finger RING-type profile. 256 297 IPR001841 -
Bisa03g2659 348 SMART ring_2 256 296 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g2659 Bisa-ChrBisa03 41009923 41010969 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g2659 169 307 C3H Transcription Factor Family AT1G26800 34.286 1.89e-23 94.7