Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g2655 ATGGAAGAGCAGGTTCTTTCCCCTTCTTCCTCAAACCTCTCTCCCTTCTCATCTTCCCTCGACGACCTCTTCTCTGCTCAGAACACGGAGGTGGACGTGGGATTGGAGTGGTTATCAGTGTTTGTGGAGGAGTGTTTTTCATGCCCAGGAAGCTGTTTATTGGGACCTCCTGATGTTGATCAAGTTAAAATCACAACCTCGAAGGCCTCGACGCCATTGCAGAGACCCAACCAGAAGCAGAGTGGTCTGCAAAATTTCGCAGTTCCAGGGAAGGCGAGAAGCAAAAGGAAGAGGCTTTCAGCGCCGAGAAGCAAAGAAACGCTAAGCCTCTGGTGGCAACATCTAAACCCGCAAAAGGAAGATATAGGCATAGGCAGAGTAACAGAGCCTCCTCTTCTGAAACAGGCGTACTGGCTGGCGGACAGCGAACTGATGGTGCCGAAGAAGGAGGAAGAAGAGGAGGAAGAGAAGAGAGCGGTGGGGAGGAGGTGCAGTCACTGTCAGGCGCAGAGGACGCCGCAGTGGAGGGCGGGGCCGATGGGACCGAAGACGCTGTGCAACGCATGTGGGGTGAGGTACAAGTCGGGGAGGTTGCTGCCGGAGTACAGGCCGGCCAAGAGCCCCACTTTTGTGAGCTACTTGCACTCCAATTCCCACAAGAAGGTCATGCAGATGAGGACGTCTCTTCTTTCTTCAACTCCCACTCATCATCACCATTAG 720 0.5375 MEEQVLSPSSSNLSPFSSSLDDLFSAQNTEVDVGLEWLSVFVEECFSCPGSCLLGPPDVDQVKITTSKASTPLQRPNQKQSGLQNFAVPGKARSKRKRLSAPRSKETLSLWWQHLNPQKEDIGIGRVTEPPLLKQAYWLADSELMVPKKEEEEEEEKRAVGRRCSHCQAQRTPQWRAGPMGPKTLCNACGVRYKSGRLLPEYRPAKSPTFVSYLHSNSHKKVMQMRTSLLSSTPTHHHH 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g2655 239 Pfam GATA zinc finger 164 198 IPR000679 GO:0006355|GO:0043565
Bisa03g2655 239 FunFam GATA transcription factor 152 238 - -
Bisa03g2655 239 MobiDBLite consensus disorder prediction 68 102 - -
Bisa03g2655 239 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 160 222 - -
Bisa03g2655 239 ProSitePatterns GATA-type zinc finger domain. 164 189 IPR000679 GO:0006355|GO:0043565
Bisa03g2655 239 ProSiteProfiles GATA-type zinc finger domain profile. 158 194 IPR000679 GO:0006355|GO:0043565
Bisa03g2655 239 SMART GATA_3 158 212 IPR000679 GO:0006355|GO:0043565
Bisa03g2655 239 Gene3D - 153 228 IPR013088 GO:0006355|GO:0008270
Bisa03g2655 239 PANTHER GATA TRANSCRIPTION FACTOR 7 233 - -
Bisa03g2655 239 MobiDBLite consensus disorder prediction 68 87 - -
Bisa03g2655 239 CDD ZnF_GATA 163 210 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g2655 Bisa-ChrBisa03 40897994 40898845 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g2655 7 226 C2C2-Gata Transcription Factor Family AT4G32890 40.244 1.90e-42 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Bisa03g2655 GATA 2e-15 CL0167
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa03g2655 03 40897994 40898845 Bisa07g2836 07 61086640 61092787 CCT
Bisa03g2655 03 40897994 40898845 Bisa03g2655 03 40897994 40898845 ECH