Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g2645 ATGCCAGAGTTGAGAAGTGGAGCTAGAAGATCGAAACGGCTTGGTGATCTTCAGCCTGCCCCACTACCTGTTGATCAAGGAGAGAATTGTGCACAACCTGCTCCAACCAGAGCCAGGAGGAGAGTTGGAGGGGGAAGAGGACGAGGTGGTAATGCCACAGCTGTAGCAAAAGGGCCTTCACCAGCAGTACCCACAAGGCGAACTGCAGCTGGTAGAGGTCGGGGAGTAAGATTAATTAATCTTGACCCTGAACCTTGTGAGGGCCTTCCTGATCCTGTTGCATTAGGAGCCCCTGAACCCCCTCGTGTTGACGCAGTGGCCAATAATAATATAGTGATGGAAGGTGGAAGTGCAGACAAGGTTGTCGGAGCTGAAGAGGAAGCAACCACAACTCCCATTCCTGAGAGGGTACAAGTTGGTAATTCTCCCTTGTACAAGATAGAAAGGAAATTGGGTAAGGGTGGTTTTGGCCAAGTCTATGTTGGCAGAAGGGCAAGTGGGGGCTCTGATCGGACAGGTCCTGATGCAATTGAGGTTGCACTGAAGTTTGAGCACAGAAATAGTAAAGGTTGCAACTATGGGCCCCCTTATGAGTGGCAAGTCTACAATACTCTGAATGGGTGTTATGGCATTCCTTGGGTTCATCACAAGGGCCGTCAAGGAGATTTCTATATTCTGGTCATGGACATGCTTGGGCCCAGTCTATGGGATGTATGGAATTCTCTTGGCCAATCTATGTCACCAAATATGGTTGCTTGCATAGCAGTGGAGGCAATATCAATTCTGGAGAAGCTCCACATGAAAGGGTTTGTGCATGGAGATGTAAAACCTGAAAACTTCTTACTTGGTCAACCTGGATCAGCTGATGAGAAGAAATTATATCTTATTGATCTTGGTTTGGCTTCGAGATGGAAAGATGCATCATCTGGTCAACATGTTGAATATGATCAGAGACCTGATATTTTCAGGGGAACAATAAGGTATGCCAGTGTGCATGCACATTTAGGTAGGACAGGAAGTAGAAGAGATGATCTTGAATCGCTGGCCTACACATTAATATTTCTCATTAAGGGGAGGTTACCATGGCAGGGTTATCAGGGTGACAATAAAAGTTTTCTTGTTTGTAAGAAGAAGATGTCCACTTCTCCAGAGTTGATGTGCTGCTTTTGTCCTGCGCCATTCAAGCAATTCCTTGAAGCTGTTACTAACATGAGATTTGATGAAGAGCCTAATTATTCCAAGCTTATATCATTCTTTGATAGCTTGATTGAACCGTGTATACCATTGAGACCAATCAGAATTGATGGAGCTTTAAAGGTTGGACAAAAGCGAGGAAGAATGCTCATTAATCTGGAAGAAGATGAGCAGCCAAAGAAGAAAGTAAGAATAGGGAGTCCTGCTACCCAGTGGATTTCAGTTTATAATGCACGCCGTCCCATGAAGCAGAGATATCACTATAATGTAGCAGACACAAGGCTTCGACAGCATGTAGACAAGGGTAATGAGGATGGGTTGTATATCAGCTGTGTTGCTTCAGCAGCAAATCTTTGGGCCTTGATCATGGATGCAGGAACGGGTTTCTCTTCCCAAGTTTATGAATTGTCATCAGTCTTCCTACATAAGGACTGGATTATGGAACAATGGGAGAAAAATTACTATATCAGTTCAATAGCTGGTGCAGCTAATGGGAGTTCCTTGGTCGTCATGTCCAAAGGAACTCCTTACACACAGCAGTCATACAAAGTGAGTGAATCATTTCCTTTTAAGTGGATTAACAAGAAGTGGAAGGAAGGATTCCATGTTACCTCCATGACCACTGCTGGCAGTCGCTGGGGTGTAGTTATGTCCAGGAATGCTGGTTATTCTGATCAGGTTGTGGAGCTTGACTTTTTGTATCCGAGTGAAGGAATACACCGGCGATGGGAGAGTGGTTATCGGATAACTGCCATGGCCGCTACCGCTGATCAAGCGGCTTTCATACTGAGCATACCAAAACGCAAATTGCTTGATGAAACTCAAGAGACTCTGCGTACTTCTGCCTTCCCTAGCACCCATGTAAAGGAGAAATGGTCCAAAAATCTCTATATTGCATCCATATGTTACGGACGGACGGTGTGCTAG 2121 0.4512 MPELRSGARRSKRLGDLQPAPLPVDQGENCAQPAPTRARRRVGGGRGRGGNATAVAKGPSPAVPTRRTAAGRGRGVRLINLDPEPCEGLPDPVALGAPEPPRVDAVANNNIVMEGGSADKVVGAEEEATTTPIPERVQVGNSPLYKIERKLGKGGFGQVYVGRRASGGSDRTGPDAIEVALKFEHRNSKGCNYGPPYEWQVYNTLNGCYGIPWVHHKGRQGDFYILVMDMLGPSLWDVWNSLGQSMSPNMVACIAVEAISILEKLHMKGFVHGDVKPENFLLGQPGSADEKKLYLIDLGLASRWKDASSGQHVEYDQRPDIFRGTIRYASVHAHLGRTGSRRDDLESLAYTLIFLIKGRLPWQGYQGDNKSFLVCKKKMSTSPELMCCFCPAPFKQFLEAVTNMRFDEEPNYSKLISFFDSLIEPCIPLRPIRIDGALKVGQKRGRMLINLEEDEQPKKKVRIGSPATQWISVYNARRPMKQRYHYNVADTRLRQHVDKGNEDGLYISCVASAANLWALIMDAGTGFSSQVYELSSVFLHKDWIMEQWEKNYYISSIAGAANGSSLVVMSKGTPYTQQSYKVSESFPFKWINKKWKEGFHVTSMTTAGSRWGVVMSRNAGYSDQVVELDFLYPSEGIHRRWESGYRITAMAATADQAAFILSIPKRKLLDETQETLRTSAFPSTHVKEKWSKNLYIASICYGRTVC 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g2645 706 FunFam Casein kinase 1-like protein 117 465 - -
Bisa03g2645 706 Pfam Protein kinase domain 145 377 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa03g2645 706 ProSitePatterns Serine/Threonine protein kinases active-site signature. 270 282 IPR008271 GO:0004672|GO:0006468
Bisa03g2645 706 CDD STKc_CK1 145 419 - -
Bisa03g2645 706 ProSiteProfiles Protein kinase domain profile. 145 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa03g2645 706 SUPERFAMILY Protein kinase-like (PK-like) 145 428 IPR011009 -
Bisa03g2645 706 PANTHER CASEIN KINASE-RELATED 145 670 - -
Bisa03g2645 706 ProSitePatterns Protein kinases ATP-binding region signature. 151 182 IPR017441 GO:0005524
Bisa03g2645 706 MobiDBLite consensus disorder prediction 1 70 - -
Bisa03g2645 706 SMART serkin_6 145 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa03g2645 706 Gene3D Transferase(Phosphotransferase) domain 1 116 460 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g2645 Bisa-ChrBisa03 40778323 40783929 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g2645 134 378 MAP Kinase Kinase Kinase AT1G63700 24.194 5.62e-07 51.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Bisa03g2645 Pkinase 5.4e-16 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa03g2645 03 40778323 40783929 Bisa03g2645 03 40778323 40783929 ECH