Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g2636 ATGGAAATTCAATTCCAGCAGCCACAGAAGCAGCATCAGAGAGCAGGCGTTCCAAGGAAGCTCAAAGGATCAAGAAACAGAAGCAGCAGCACAAACAAATTCTTGGGGGTGAGGCAGAGGCCTTCGGGGAGATGGGTGGCTGAGATCAAAGACACAACACAGAAGATAAGGATGTGGCTTGGCACATTTGAGACTGCAGAGGAGGCAGCCAGAGCTTATGATGAAGCAGCATGCCTCCTTCGAGGATCCAACACTCGCACCAACTTCATCACTCACGTGTCGTTGGACTCTCCTCTTGCTTCTCGGATTCGAAATCTGCTCAACAGTAAAAAAGCAGGAACCAGACAACAACAAGAACAGCAAGAACATCAACATGTGGATGCCTCTAGCAGCACTAGTAGTACGACTAGTATTAGTAGTAATAGTTCTACTTCTAGTTCTAGCAATAACGGTAGCAATGAGAATTCTCCTTGCAGTGGGGCAATTCAAGATGCTCAGTTGTTTGACGATGCTTACAGACCAGATTTGAGCAGTTGCAGGGAGGAATTCGGGTCGGGATCCGTGTCCAATATTCCATGGGGCGGGTTTGGACAGGTCTTTGATCGGTTTCCTTTTGCTCAAGTTTCGGATTTACAGAAGACTGAGGGTGGTCTGCCAGATACAGCTGACTTGGAGCTCTCAGAATTCGAGAGGATGAAAGTTGAGAGGCAGATATCAGCTTCACTCTATGCAATCAACGGAGTGCAAGAGTACATGGAAACTGTTCAGGACTCTAATGAAGCTCTTTTCTGGGATCTTCCGCCCTTGTGTTCATTGTTCTGTTAA 825 0.4703 MEIQFQQPQKQHQRAGVPRKLKGSRNRSSSTNKFLGVRQRPSGRWVAEIKDTTQKIRMWLGTFETAEEAARAYDEAACLLRGSNTRTNFITHVSLDSPLASRIRNLLNSKKAGTRQQQEQQEHQHVDASSSTSSTTSISSNSSTSSSSNNGSNENSPCSGAIQDAQLFDDAYRPDLSSCREEFGSGSVSNIPWGGFGQVFDRFPFAQVSDLQKTEGGLPDTADLELSEFERMKVERQISASLYAINGVQEYMETVQDSNEALFWDLPPLCSLFC 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g2636 274 SUPERFAMILY DNA-binding domain 33 90 IPR016177 GO:0003677
Bisa03g2636 274 PRINTS Ethylene responsive element binding protein signature 34 45 IPR001471 GO:0003700|GO:0006355
Bisa03g2636 274 PRINTS Ethylene responsive element binding protein signature 56 72 IPR001471 GO:0003700|GO:0006355
Bisa03g2636 274 FunFam ethylene-responsive transcription factor RAP2-11 32 91 - -
Bisa03g2636 274 MobiDBLite consensus disorder prediction 111 160 - -
Bisa03g2636 274 MobiDBLite consensus disorder prediction 123 160 - -
Bisa03g2636 274 Gene3D AP2/ERF domain 32 91 IPR036955 GO:0003700|GO:0006355
Bisa03g2636 274 MobiDBLite consensus disorder prediction 23 37 - -
Bisa03g2636 274 CDD AP2 33 89 IPR001471 GO:0003700|GO:0006355
Bisa03g2636 274 Pfam AP2 domain 34 82 IPR001471 GO:0003700|GO:0006355
Bisa03g2636 274 ProSiteProfiles AP2/ERF domain profile. 33 90 IPR001471 GO:0003700|GO:0006355
Bisa03g2636 274 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 23 239 - -
Bisa03g2636 274 SMART rav1_2 33 96 IPR001471 GO:0003700|GO:0006355
Bisa03g2636 274 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g2636 Bisa-ChrBisa03 40594163 40594987 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g2636 11 274 AP2-EREBP Transcription Factor Family AT5G19790 43.015 9.38e-51 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bisa03g2636 AP2 3.9e-13 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa03g2636 03 40594163 40594987 Bisa03g2636 03 40594163 40594987 ECH