Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g2635 ATGAGGAATCCAAGTTCAACGAGCAAGACCACCACGCCATGTTGCAGCAAGGTGGGGATCAAGCGAGGCCCATGGACCGCCGAGGAAGATGAGATCTTAGCCAATTTCGTAAAAAAGGAAGGGGAGGGACGATGGCGCACCCTCCCCAAGCGGGCGGGCCTCCACCGTTGCGGCAAGAGCTGCCGCCTCCGCTGGATGAACTACCTCCGCCCCTCAGTCAAGCGTGGCAATATTGCTCCCGACGAAGAAGACCTCATCCTCCGTCTCCACCGCTTGCTCGGCAACAGGTGGTCTTTGATAGCTGGGAGGATACCTGGAAGGACAGACAACGACATCAAGAACTACTGGAATACCCATCTCAGCAAGAAGCTCATAAGTCAGGGAATAGACCCCAGGACTCACAAGCCATTAGAAACTCAAGAACACAAACTCAATGATCGCAATTCTCAAAATACAACATTTTTGGGCCCTCGTTCAATTCCAGAAATTGGCAGCTGCAGTAGCAGCCAGCAGAATCAGAGAAAAGCTACTGAAAATGATTGGGATGGGTGTGGCAAAGTGATGGGGCTTGAAGTTGAAGATGGAGGAGAGAATAATAACGAGAGGATTATTGGGGAGGACGATACGCTGTCGTCGTTTCTGGATTCTTTGATCAACGACAACGAAGGCCAAGGGACTCAAAAGCTTGAGCTGCAGGCTGATCAACATGTTTTACCAGTTTCAACGCCACAACCACTAACTTCGTCCATGCAATCTTTTGATCTTTCCTTTTGGGAAGCTGAATTTCGAAGTGTCGTAGGGGATGAACATTATGGTTCACTCTTCAACAAGAAAGCTGGTAATGGAAGAAGCCCAAGGAAGTTGGAGTTGAAGTTAGAGTTGGAGTTGGAGTTGGTAGCTCAGCAAGCTTTGTAG 915 0.494 MRNPSSTSKTTTPCCSKVGIKRGPWTAEEDEILANFVKKEGEGRWRTLPKRAGLHRCGKSCRLRWMNYLRPSVKRGNIAPDEEDLILRLHRLLGNRWSLIAGRIPGRTDNDIKNYWNTHLSKKLISQGIDPRTHKPLETQEHKLNDRNSQNTTFLGPRSIPEIGSCSSSQQNQRKATENDWDGCGKVMGLEVEDGGENNNERIIGEDDTLSSFLDSLINDNEGQGTQKLELQADQHVLPVSTPQPLTSSMQSFDLSFWEAEFRSVVGDEHYGSLFNKKAGNGRSPRKLELKLELELELVAQQAL 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g2635 304 CDD SANT 80 120 IPR001005 -
Bisa03g2635 304 FunFam transcription repressor MYB5-like 79 149 - -
Bisa03g2635 304 CDD SANT 24 69 IPR001005 -
Bisa03g2635 304 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 17 69 IPR017930 -
Bisa03g2635 304 FunFam Myb transcription factor 19 75 - -
Bisa03g2635 304 ProSiteProfiles Myb-like domain profile. 17 69 IPR001005 -
Bisa03g2635 304 ProSiteProfiles Myb-like domain profile. 70 120 IPR001005 -
Bisa03g2635 304 SUPERFAMILY Homeodomain-like 19 116 IPR009057 -
Bisa03g2635 304 Gene3D - 22 74 - -
Bisa03g2635 304 MobiDBLite consensus disorder prediction 127 182 - -
Bisa03g2635 304 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 12 191 - -
Bisa03g2635 304 MobiDBLite consensus disorder prediction 146 178 - -
Bisa03g2635 304 Gene3D - 79 152 - -
Bisa03g2635 304 SMART sant 74 122 IPR001005 -
Bisa03g2635 304 SMART sant 21 71 IPR001005 -
Bisa03g2635 304 Pfam Myb-like DNA-binding domain 22 69 IPR001005 -
Bisa03g2635 304 Pfam Myb-like DNA-binding domain 79 120 IPR001005 -
Bisa03g2635 304 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 70 124 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g2635 Bisa-ChrBisa03 40540251 40543334 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g2635 7 220 MYB Transcription Factor Family AT3G13540 62.500 3.39e-86 257
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bisa03g2635 Myb_DNA-binding 6e-15 CL0123