Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g2612 ATGGCTGAGCCACACTGCGATGCCACTTCAGGACCTGGGCGCAGAGGGGCAGCTACAAAGCGCGCCACGGCGGCACCACCCTGTGGGGCATGCAAGTTCTTGAGGAGGAAGTGCATTAGTGGGTGCATCTTCGCCCCACATTTCGGTTCGGAGCAGGGTGCGGCACGCTTTGCGGCGGTGCACAAGGTGTTTGGTGCCAGCAACGTGTCCAAGATCTTGCTGCATATTCCGGCGAACCGCCGCCACGAAGCCGCCATCACTATAGCCTTCGAGGCTCAGGCAAGGTTGTCCGATCCCGTGTATGGTTGCGTGTCCACCATTCTTGCCTTGCAGCAACAGGTGGCTTCTCTGCAAGCAGAACTGGCCACGGTGCAGAGCCAACTGAGAAACAGTCGGTTAGCATTTGCGAGCGCTATTCGGAGCACGCCGCCGCAGCTGGCGGCGCCACCAAACATGAATTCATCGGCGCTGCAACCGGCGTACTCCAACAATTCATCTGCCTCCACTAATCTCCCAAACATGAGCAGCTGCTTCGACCCTCCTGCGATGGAGGCCGCACATTCGTTCGAGCCTCCTCATCTCTCTCGCTTGTCCCAGCCAGACGAAGATGACGAGCTGGAAAGTAAGATTCCTCATTTGTTTGACAATGGCGTGGTTCACCCTTGA 666 0.5796 MAEPHCDATSGPGRRGAATKRATAAPPCGACKFLRRKCISGCIFAPHFGSEQGAARFAAVHKVFGASNVSKILLHIPANRRHEAAITIAFEAQARLSDPVYGCVSTILALQQQVASLQAELATVQSQLRNSRLAFASAIRSTPPQLAAPPNMNSSALQPAYSNNSSASTNLPNMSSCFDPPAMEAAHSFEPPHLSRLSQPDEDDELESKIPHLFDNGVVHP 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g2612 221 Pfam Lateral organ boundaries (LOB) domain 27 125 IPR004883 -
Bisa03g2612 221 MobiDBLite consensus disorder prediction 144 176 - -
Bisa03g2612 221 MobiDBLite consensus disorder prediction 196 211 - -
Bisa03g2612 221 ProSiteProfiles LOB domain profile. 26 128 IPR004883 -
Bisa03g2612 221 Coils Coil 107 134 - -
Bisa03g2612 221 PANTHER LOB DOMAIN CONTAINING PROTEIN 25 167 - -
Bisa03g2612 221 MobiDBLite consensus disorder prediction 144 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g2612 Bisa-ChrBisa03 40036455 40038850 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g2612 27 208 AS2 family AT3G03760 60.914 7.35e-73 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Bisa03g2612 LOB 7.9e-37 No_clan