Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g2611 ATGATGGAACCCCTTTCGAAATCCCGCAAATTCAATGAAGAACAGAAAGGCGACAAAGGACCTTTTTTCCTTCAATGCGCAGAGCTGATCCTCCCATGGTTAACCCCTCTGGAGCTCGCCAATGTCTCTTTGACCAGCAAAGCCTTCTACCAAATCGCCAAGGCCATCACTTTCCGCCGTTCATCTGATTCTTCTAGAGGATTCGAGAATCTGCCAATCCCATTTCGCAACACCGTCGATACTTACCCATACGCGTACTTCGTCTACACTCCTTCCCTAATTTTACCTTCAGCTTCCCCACTTCGTCGTCAAACATGGGGTTCGAATTCCGCTGGCAGCCCCATCTTGGGTGGAGAGCTTTCTGTGGAAACGTTGAGTTTGGTTGATGAGCAGGGCCAGAATGTATCTGGCTGTGACTGTGATACTTGTGAGGATGTGGGGGATGACGATAGTAGGTGTCCTTGTTCGAGCTTGGCTGGGTTTGATGTGGCTAGCGAGTGTGGACGGAGTTGTAGGTGCGGGTTAGAGTGTGGGAATCGGCTGAGTCCGAAGGGGATTACAGTTCGATCGAAAATCGTGAGAGATAGGAGGAAAGGATGGGGTTTGTATGCTGATCAGTTGATTCAGAAAGGGCAGTTCATATGTGAGTATGCAGGTGAACTCTTGACAACTGATGAAGCAAGGAGGAGGCATCAACATTATGATCAACTGTCATCACAGGGACATTTTTCTTCTGCTCTTTTGGTTGTAAGGGAGCATCTGCCATCTGGAAAGGCATGTTTGAGACTGAACATTGATGCCACAAGCATAGGAAATGTTGCACGCTTCATTAATCATTCCTGTGATGGGGGTAATGTAAGCACAAAGCTAGTTAGAAGGTCGGGAGCCTTATTTCCTCGCCTTTGCTTCTTTGCTTCGAAAGATATCCAAGAAGATGAAGAGCTTACTTTCAGCTATGGATATATCAGGACAAGGCCCAAGGGTTTGCCGTGCTTTTGTGATAGCTCTTCTTGCCTTGGAACATTGCCTTCAGAAGATACTTAA 1044 0.4713 MMEPLSKSRKFNEEQKGDKGPFFLQCAELILPWLTPLELANVSLTSKAFYQIAKAITFRRSSDSSRGFENLPIPFRNTVDTYPYAYFVYTPSLILPSASPLRRQTWGSNSAGSPILGGELSVETLSLVDEQGQNVSGCDCDTCEDVGDDDSRCPCSSLAGFDVASECGRSCRCGLECGNRLSPKGITVRSKIVRDRRKGWGLYADQLIQKGQFICEYAGELLTTDEARRRHQHYDQLSSQGHFSSALLVVREHLPSGKACLRLNIDATSIGNVARFINHSCDGGNVSTKLVRRSGALFPRLCFFASKDIQEDEELTFSYGYIRTRPKGLPCFCDSSSCLGTLPSEDT 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g2611 347 ProSiteProfiles SET domain profile. 184 320 IPR001214 GO:0005515
Bisa03g2611 347 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 59 338 - -
Bisa03g2611 347 ProSiteProfiles Post-SET domain profile. 327 343 IPR003616 -
Bisa03g2611 347 SMART set_7 188 326 IPR001214 GO:0005515
Bisa03g2611 347 SUPERFAMILY SET domain 57 333 IPR046341 -
Bisa03g2611 347 Pfam SET domain 199 320 IPR001214 GO:0005515
Bisa03g2611 347 Gene3D SET domain 44 326 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g2611 Bisa-ChrBisa03 40033163 40035542 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g2611 166 342 C2H2 Transcription Factor Family AT2G23740 33.684 4.79e-24 101
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Bisa03g2611 SET 5.9e-20 No_clan