Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g2588 ATGGAAGATCAAGGTAAAGGGCATCATCATCAACAGGGCCAAGTCCAACAACAACATCCTCATCCTCAGGACTCCAACAGCCCGAGCCATGGGTCGGAGAGGAGCGAGCCGGTGCGGTCGAGGTGGACCCCGAAGCCTGAGCAGATCCTAATCCTCGAGTCCATCTTCAACAGCGGCATGGTCAACCCCCCCAAGGAGGAGACCGTCCGCATCCGCAAGCTCCTCGAGAAGTTCGGCTCCGTCGGAGACGCCAACGTCTTCTACTGGTTCCAGAACCGCCGCTCCCGCTCCCGCCGCCGCCAGCGCCAGCTCCAGGCCTCCCTCGACCACCGCAACCAGCTTCCTCAGCCTCCGCAGCTAGGCGGTGGTGCAACTGCAATTCCCTACGACCCCACCAGGACTGATCACTCCCGTACTTCTCCTCCTCCGCCGCCGCCTCCTCCGCCCATGGCGTTTCCCGACCTCTCTGGCTCCTCCTCTTCCTCCGGTGGAATCCTCCAAAACCAAGAGCCCATGGACCCTCTCTTCTCCGTATCTCCTCAAATGGGTTTCCCCGAAATTGATCCTCAGACTTCCGCTTTGTACCCTCCGGATCCCTCCGCTTTCAACTACCATTGTGGACTCATCACAGTGTTTATCAATGGGGTAGCAACAGAAGTTCCAAGGGGACCAATGGACGTCAGAACAATGTTTGGGCAAGACGTAGTGTTGGTCCATTCCTCTGGAGTGCCACTTCCCACCAATGAGTTCGGTTACTTGATGCAGAGCTTGCAGCATGGCGAAAGCTACTTTCTGATGGTCAGCACATCTCCAAATTAA 819 0.5739 MEDQGKGHHHQQGQVQQQHPHPQDSNSPSHGSERSEPVRSRWTPKPEQILILESIFNSGMVNPPKEETVRIRKLLEKFGSVGDANVFYWFQNRRSRSRRRQRQLQASLDHRNQLPQPPQLGGGATAIPYDPTRTDHSRTSPPPPPPPPPMAFPDLSGSSSSSGGILQNQEPMDPLFSVSPQMGFPEIDPQTSALYPPDPSAFNYHCGLITVFINGVATEVPRGPMDVRTMFGQDVVLVHSSGVPLPTNEFGYLMQSLQHGESYFLMVSTSPN 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g2588 272 MobiDBLite consensus disorder prediction 94 182 - -
Bisa03g2588 272 Pfam Homeodomain 39 99 IPR001356 GO:0003677
Bisa03g2588 272 SMART HOX_1 37 104 IPR001356 GO:0003677
Bisa03g2588 272 MobiDBLite consensus disorder prediction 10 33 - -
Bisa03g2588 272 MobiDBLite consensus disorder prediction 154 175 - -
Bisa03g2588 272 SUPERFAMILY Homeodomain-like 32 106 IPR009057 -
Bisa03g2588 272 MobiDBLite consensus disorder prediction 1 45 - -
Bisa03g2588 272 FunFam WUSCHEL-related homeobox 11 39 106 - -
Bisa03g2588 272 ProSiteProfiles 'Homeobox' domain profile. 35 100 IPR001356 GO:0003677
Bisa03g2588 272 Gene3D - 39 106 - -
Bisa03g2588 272 MobiDBLite consensus disorder prediction 137 153 - -
Bisa03g2588 272 PANTHER WUSCHEL-RELATED HOMEOBOX 11 21 268 IPR044558 GO:0003700|GO:0048830
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g2588 Bisa-ChrBisa03 39543860 39545301 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g2588 16 267 Wox Gene Family AT3G03660 53.430 4.78e-68 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Bisa03g2588 Homeodomain 3.4e-13 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa03g2588 03 39543860 39545301 Bisa03g2588 03 39543860 39545301 ECH