Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g2578 ATGGTGAGACCTCCTTGCTGTGACAAGGTTGGTATCAAGAAGGGTCCATGGACACCTGAGGAGGACATCATCCTCGTTTCTTACATCCAAGAACATGGTCCTGGGAATTGGAGATCAGTACCTACAAATACTGGGTTGTTGAGGTGCAGCAAAAGTTGCAGGCTGAGATGGACCAACTACCTCAGGCCTGGAATTAAGAGAGGGAACTTCACACCCCATGAGGAAGGAATGATAGTTCATCTGCAAGCTCTGCTGGGTAACAAATGGGCAGCCATAGCTTCGTACCTTCCACAGAGAACAGACAACGATATAAAGAACTATTGGAACACACATCTGAAGAAGAAGCTGAAGAAATTTCAAGCAGGATTGGACCCTCAGTCTGCAGCAGCACCGAACTCAACAATAGCCACTAGTCAGTTTGTGTCAAAGAGCTTCAATAGCGGAAGTAGCTTAGATATGAAAATTAGTACTCCGTCTCAGTCATGTAGCTATGCATCAAGCACTGAGAACATCTCACGCCTCTTACAAGGCTGGATGAGATCCTCTCCAAACCAACATCACAAGGAGCTTCAGAGGGAGAAGATGGTGAAGTCTGATTTAAAAGCTGAGTTCTGTGAAACAAAAGATGAGCAAGAGGGAGAAATGATGTCCCATGAAGAGTTTGATTCTATTTTGTCTTTTGAGAATTTAAATAATGCTTCTGCTTTGGACAAGTCCACTGGTGACTCTATGCCTCAGAAGAGTTCTGAAGAAGCCGCATCATCTGGTGAGGGGAATAAGCTAAGATGTGAGGACAGTTGTACTATTGATCCTCCTTTCTCAGTGCTCGAGAAGTGGCTCTTGGATGAAAATGTCGGCCATGCAGAGGAGATGATGGAGTTATCCCCTATGTTCTAA 897 0.4482 MVRPPCCDKVGIKKGPWTPEEDIILVSYIQEHGPGNWRSVPTNTGLLRCSKSCRLRWTNYLRPGIKRGNFTPHEEGMIVHLQALLGNKWAAIASYLPQRTDNDIKNYWNTHLKKKLKKFQAGLDPQSAAAPNSTIATSQFVSKSFNSGSSLDMKISTPSQSCSYASSTENISRLLQGWMRSSPNQHHKELQREKMVKSDLKAEFCETKDEQEGEMMSHEEFDSILSFENLNNASALDKSTGDSMPQKSSEEAASSGEGNKLRCEDSCTIDPPFSVLEKWLLDENVGHAEEMMELSPMF 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g2578 298 FunFam MYB-related transcription factor 13 66 - -
Bisa03g2578 298 CDD SANT 69 112 IPR001005 -
Bisa03g2578 298 Gene3D - 13 66 - -
Bisa03g2578 298 SMART sant 13 63 IPR001005 -
Bisa03g2578 298 SMART sant 66 114 IPR001005 -
Bisa03g2578 298 CDD SANT 16 61 IPR001005 -
Bisa03g2578 298 Gene3D - 69 134 - -
Bisa03g2578 298 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Bisa03g2578 298 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Bisa03g2578 298 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Bisa03g2578 298 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
Bisa03g2578 298 MobiDBLite consensus disorder prediction 235 255 - -
Bisa03g2578 298 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 214 - -
Bisa03g2578 298 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 116 IPR017930 -
Bisa03g2578 298 MobiDBLite consensus disorder prediction 235 263 - -
Bisa03g2578 298 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Bisa03g2578 298 FunFam Transcription factor MYB60 68 140 - -
Bisa03g2578 298 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g2578 Bisa-ChrBisa03 39288061 39289312 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g2578 1 148 MYB Transcription Factor Family AT5G62470 76.510 3.97e-80 245
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bisa03g2578 Myb_DNA-binding 1e-14 CL0123