LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bisa03g2574	ATGCTGTTACAGTCTTCACTCTGCAGCTGTAGTATGAAGCGTCCGTGCAGGTTGATTCAAGCTTTGGCTCTATCGATTGTGCTCTTAGTAGCATTTAATCCAAACCCATCGTTATCAGATGCTTCGAGTCACTGCGATTTTCCGGCCATCTTCAACTTCGGAGACTCCAATTCCGACACCGGTGGCCTCTCTGCTGCCTTCGGACAAGCTGGTCCTCCTCACGGCGAGTCCTACTTCCGCCTCCCTGCCGGCCGCTACTGCGACGGTCGTCTCGTCATCGATTTCATAGCTAAGAAGCTGGGGCTACCATATCTGAATGCTTACCTTGATGCGGTTGGCTCAAATTTTACGCATGGAGCTAACTTCGCAACGGCTGGATCCACCATAAGGCCTCAGAACACAACCCTTCATCAGGTTGGCGGATTTAGTCCTTTCTCTTTGGATGTTCAGTTCAATCAATTCAATGATTTCCAGCGCAGATCTCAAATTTTTCGCGATAAAGGAGGAGTTTATAAGACATTGTTACCAAAAGCACAAGACTTTTCTCGTGCATTATACACTTTCGATATTGGCCAGAATGACTTGGCAGCTGGTTACTTCCAAAACATGTCCATAGATCAAGTCAAAGCATATGTTCCTGATGTTTTATCTCAGTTCAAGAACATTATTAAGTACGTGTATGATCGTGGAGGTAGGTCATTCTGGGTACATAATACGGGTCCTGTAGGTTGTTTACCATACATAATGGACCTTCATCGAGTTACAGCAGCTCAGGTGGATAAAGCGGGATGTGCCATCCCTTACAATGAAGTTGCTCAATTCTTCAATCGTCATTTAAAAGCAGCAGTTCTTCAACTCAGAAAGCAACTTCCCTTAGCTGCCATCACCTACGTTGATGTCTACTCGGTGAAGTACTCGCTCATCAGCCGAGCAAAGAAACACGGTTTTGAGGAAGCAGTGAGAGCTTGCTGTGGGCATGGTGGGAAGTACAACTACAATATGCACATTGGATGCGGAGGAAAGATAAAGGTTCATGGAAAAGAAGTGTTGGTGGGGAAGCCATGCAAGGATCCATCAGTTTGGGTTAACTGGGATGGCGTGCACTACACTCAGGCTGCTAATAAATGGGTATTTGAACGAATTGTGGACGGATCATTTTCAGATCCTCCTATTCCATTGAACATGGCATGTCATAGGTACCACAACTGA	1209	0.4582	MLLQSSLCSCSMKRPCRLIQALALSIVLLVAFNPNPSLSDASSHCDFPAIFNFGDSNSDTGGLSAAFGQAGPPHGESYFRLPAGRYCDGRLVIDFIAKKLGLPYLNAYLDAVGSNFTHGANFATAGSTIRPQNTTLHQVGGFSPFSLDVQFNQFNDFQRRSQIFRDKGGVYKTLLPKAQDFSRALYTFDIGQNDLAAGYFQNMSIDQVKAYVPDVLSQFKNIIKYVYDRGGRSFWVHNTGPVGCLPYIMDLHRVTAAQVDKAGCAIPYNEVAQFFNRHLKAAVLQLRKQLPLAAITYVDVYSVKYSLISRAKKHGFEEAVRACCGHGGKYNYNMHIGCGGKIKVHGKEVLVGKPCKDPSVWVNWDGVHYTQAANKWVFERIVDGSFSDPPIPLNMACHRYHN	402

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bisa03g2574	402	FunFam	GDSL esterase/lipase At1g09390	38	386	-	-
	Bisa03g2574	402	Coils	Coil	402	402	-	-
	Bisa03g2574	402	Gene3D	SGNH hydrolase	37	384	IPR036514	-
	Bisa03g2574	402	CDD	SGNH_plant_lipase_like	48	385	IPR035669	-
	Bisa03g2574	402	Pfam	GDSL-like Lipase/Acylhydrolase	50	381	IPR001087	GO:0016788
	Bisa03g2574	402	PANTHER	ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN	33	390	-	-
	Bisa03g2574	402	SUPERFAMILY	SGNH hydrolase	50	382	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bisa03g2574	Bisa-ChrBisa03	39245544	39249336	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bisa03g2574	48	395	Acyl Lipid Metabolism Gene Families	AT4G10950	28.532	6.19e-32	123