Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g2551 ATGCAAAGGGGAAGTCGGGTCGGCAAGCCACATTTCAAAGTGTTCAACCTCGATCTCCCCTCTACTATTTGCTTGTCTAATTTCGAAGTAAGCATAGCTATGTATAACACACAGAAATTCTCGCCAGCTACTGCGGTGCCTCATGAGGCTCAAGGCGGTGCTGAGCAATATACAAATATTGGGGTTTTGGGAGGATCTCCAACAAAAAATGCCACACCTAATGGGGGAAGCGGGAAACAACGGCTACGATGGACATCAGATCTTCATGATCGTTTTGTGGATGCCATTTCACAACTCGGTGGACCAGATAGGGCAACACCGAAAGGTGTTTTGAGACTGATGGGCGTACCTGGACTTACTATTTATCACATTAAAAGCCACCTACAGAAGTATCGTCTTGCGAAGTACCTGCCTCAATCTCCAGCTGGAGCTACAAAAGATGACAAGAGAAATTTTGGAGACAGCATTTCTGGCACAGATTCTTCCCCGCAAATGCAAATCAGTGATGCTCTGAGAATGCAAATGGAAGTTCAGAAACGCCTTCAGGATCAGCTTGAGGTTCAAAAGCAGCTACAAATGAGAATTGAAGCTCAGGGTACATACTTGCAAAAGATCATAGAGGAACATCAGAGACTAGGTAGCACCTTGGGAACTTCGGAAACACTACAATCGTCCATAGATAAACAAGATCTTTCCCACTCTGAGCCTTCTGGTGATGCCTCTTCAGGGACTTCGTCTCCACTTAAAAAGCAGAGAATTGATAATTGTTCAAAGGAAGACTTTGCTGCATCTCAGGTACCACCAAAAACTGCAGTGACTGATTTTGATGTTGGTCGAAAAGATCAAGACCTTTATGATGATAATGCTGGGTTATGA 876 0.4429 MQRGSRVGKPHFKVFNLDLPSTICLSNFEVSIAMYNTQKFSPATAVPHEAQGGAEQYTNIGVLGGSPTKNATPNGGSGKQRLRWTSDLHDRFVDAISQLGGPDRATPKGVLRLMGVPGLTIYHIKSHLQKYRLAKYLPQSPAGATKDDKRNFGDSISGTDSSPQMQISDALRMQMEVQKRLQDQLEVQKQLQMRIEAQGTYLQKIIEEHQRLGSTLGTSETLQSSIDKQDLSHSEPSGDASSGTSSPLKKQRIDNCSKEDFAASQVPPKTAVTDFDVGRKDQDLYDDNAGL 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g2551 291 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 76 136 IPR017930 -
Bisa03g2551 291 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 78 250 IPR044848 GO:0003700
Bisa03g2551 291 SUPERFAMILY Homeodomain-like 78 133 IPR009057 -
Bisa03g2551 291 Gene3D - 78 137 - -
Bisa03g2551 291 MobiDBLite consensus disorder prediction 141 164 - -
Bisa03g2551 291 NCBIfam myb-like DNA-binding domain, SHAQKYF class 79 134 IPR006447 GO:0003677
Bisa03g2551 291 Pfam MYB-CC type transfactor, LHEQLE motif 165 211 IPR025756 -
Bisa03g2551 291 MobiDBLite consensus disorder prediction 215 291 - -
Bisa03g2551 291 Pfam Myb-like DNA-binding domain 82 132 IPR001005 -
Bisa03g2551 291 MobiDBLite consensus disorder prediction 274 291 - -
Bisa03g2551 291 MobiDBLite consensus disorder prediction 215 251 - -
Bisa03g2551 291 FunFam Myb family transcription factor 78 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g2551 Bisa-ChrBisa03 38620144 38624214 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g2551 68 225 G2-like Transcription Factor Family AT4G28610 50.633 6.07e-48 163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Bisa03g2551 Myb_DNA-binding 9.9e-07 CL0123