Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g2531 ATGGAACAAGATTCGGGTGAAGAATCTAATCCTCCATCACCTAGCTCTGTAGATAAGTCGAGGGTTTTGAATGCGAAGCCATTGAGAACACTTTTTCCAGTTTTCTCTTCTTCATCTAAGCCTTCTTCATCTAACTCTTCTGGTCTTTTTCTTCCTGAGATTTCTTCCTTCCATCCATTCTTCTTCTTGCCCGAGTCCCAGAGGCATTCTCAACAAAACCCACAAACCCCAATATCTATATCAGCAATTCCAGTCAGTTCATTCAGAATACCACCATCTCCAAATGGAAATCGAAGTACCCTTCATGATGAAGAAGATGGATATACAGAAGAAACACTAAGGCACAAGCCACAGAAGAAGGGAAAGCAGAGTGATGCAGATACACTAGTTAATGATATTCTTATATCAATTAATCCCAGAGTTTTTGATACATTGAAAGAGCCTGATGGTGGGAGGGACTCAGTGGCATACACACTTATGATATATGAGGTGTTGAGAAGGAAGATAGCTCAGATTGAAGAGGCAAAGGAAGGGAATGTGGGAGTCTCAAAGCGGTCTGACTTAAGAGCAGGCACAATTATGATGAACAAAGGGCTTAGGACTAATAGCAAGAGGCGGATCGGGGCGGTGCCCGGTGTTGAAGTCGGGGATATTTTCTACTTCAGGATGGAATTGTGTGTGGTGGGGTTGCATGCTCCATCCATGGCTGGAATAGATTACTTGGGTGTGAAGGTAAGTCAAGAGGAAGAAGAGCCATTAGCTGTGAGTATTATATCATCTGGTGGATATGAAGATCATGTCGAGGGTGGTGATGTGCTGATTTACAGCGGCCAAGGTGGGGTTAACCGGAGCAAGGAAGCGAGTGATCAGAAGCTTGAAAGGGGCAATCTTGCATTGGAAAAGAGTTTACATAGAGGGAATGAAGTAAGAGTAACTAGGGGTCTCAAGGACTTGGCAAATCCTACAGGGAAGGTTTATGTCTATGATGGTCTCTACAAGATTCAGGATTCATGGATGGAGAAAGGAAAGTCAGGTTTCAATGTATTCAAGTTTAAACTAGTCCGATCACCGGGGCAGCCAGAAGGATACATGACATGGAAAACCATTCAAAAGTGGACCGAGAAATCCATTTCAAGAGAAGGTCTTATATTGCATGATCTTACATCTGGGACAGAAAATTTACCTGTTTGTCTTGTGAATGATGTTGATGATGAAAAGGGCCCTGCATACTTTACTTATAGTCCTACTCTCAAGAACTTGAAGCGAATAAATCTGGGGGAAGTGTCATCTTCCGGATGCGACTGTGTTGATGGGTGCCTTCCTGGGAAATTAAGCTGTCCTTGCATTCAAAAGAACGGAGGCTTTCTCCCATATTCTGCAAATGGAGTTGTCATGGACCTAAAATCCATGACATATGAGTGTGGTCCTTCTTGCAAGTGTCCCCTTAATTGTCGGAACCGGGTTTCACAAGGCGGCCTGCGATTTCGATTCGAGGTGTTTAAAACTAAGGACAAAGGGTGGGGTCTAAGATCCTGGGATCCTATTCGTGCAGGGTCTTTTATATGTGAGTATGCAGGGGAAGTCATAGATAATTCTAATTTACAAGAGCTTGGTGATGAAAATGAAGAAGAAAACTACATTTTCAATTCTAGAAACATCAATCAGCAACTTGAAATTTTTCCTAGTGATACTGAAGCACAAAAGCTCCCATGTCCTCTGTATATATCAGCAAAATATGATGGGAATGTTGGTCGGTTTATGAACCATAGTTGCTCTCCTAATGTGTTGTGGCGAAAAGTGTTACGTGCAAATAAGGATGAGTCTGATCTCCACATAGCTTTTCATGCAGTGAGACACATTCCTCCTATGACAGAGTTAACGTATGATTATGGGGTAGTTCTTTCCCTCACAGAGAGCCACAAGAAGAAGAAATGCTTGTGTGGATCACTGAAATGCAGGGGATATTTTAGTTAA 1974 0.425 MEQDSGEESNPPSPSSVDKSRVLNAKPLRTLFPVFSSSSKPSSSNSSGLFLPEISSFHPFFFLPESQRHSQQNPQTPISISAIPVSSFRIPPSPNGNRSTLHDEEDGYTEETLRHKPQKKGKQSDADTLVNDILISINPRVFDTLKEPDGGRDSVAYTLMIYEVLRRKIAQIEEAKEGNVGVSKRSDLRAGTIMMNKGLRTNSKRRIGAVPGVEVGDIFYFRMELCVVGLHAPSMAGIDYLGVKVSQEEEEPLAVSIISSGGYEDHVEGGDVLIYSGQGGVNRSKEASDQKLERGNLALEKSLHRGNEVRVTRGLKDLANPTGKVYVYDGLYKIQDSWMEKGKSGFNVFKFKLVRSPGQPEGYMTWKTIQKWTEKSISREGLILHDLTSGTENLPVCLVNDVDDEKGPAYFTYSPTLKNLKRINLGEVSSSGCDCVDGCLPGKLSCPCIQKNGGFLPYSANGVVMDLKSMTYECGPSCKCPLNCRNRVSQGGLRFRFEVFKTKDKGWGLRSWDPIRAGSFICEYAGEVIDNSNLQELGDENEEENYIFNSRNINQQLEIFPSDTEAQKLPCPLYISAKYDGNVGRFMNHSCSPNVLWRKVLRANKDESDLHIAFHAVRHIPPMTELTYDYGVVLSLTESHKKKKCLCGSLKCRGYFS 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g2531 657 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 111 649 - -
Bisa03g2531 657 MobiDBLite consensus disorder prediction 1 20 - -
Bisa03g2531 657 ProSiteProfiles Pre-SET domain profile. 431 492 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Bisa03g2531 657 Pfam SET domain 506 631 IPR001214 GO:0005515
Bisa03g2531 657 SUPERFAMILY PUA domain-like 190 375 IPR015947 -
Bisa03g2531 657 ProSiteProfiles Post-SET domain profile. 641 657 IPR003616 -
Bisa03g2531 657 MobiDBLite consensus disorder prediction 1 22 - -
Bisa03g2531 657 Gene3D SET domain 378 656 IPR046341 -
Bisa03g2531 657 ProSiteProfiles SET domain profile. 495 631 IPR001214 GO:0005515
Bisa03g2531 657 SMART set_7 495 637 IPR001214 GO:0005515
Bisa03g2531 657 Pfam Pre-SET motif 388 487 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Bisa03g2531 657 SMART G9a_1 203 359 IPR003105 -
Bisa03g2531 657 SUPERFAMILY SET domain 393 654 IPR046341 -
Bisa03g2531 657 MobiDBLite consensus disorder prediction 99 125 - -
Bisa03g2531 657 FunFam Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH5 191 374 - -
Bisa03g2531 657 Gene3D - 190 377 IPR036987 -
Bisa03g2531 657 Pfam SAD/SRA domain 207 359 IPR003105 -
Bisa03g2531 657 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 70 657 IPR025794 GO:0016571
Bisa03g2531 657 ProSiteProfiles YDG domain profile. 208 355 IPR003105 -
Bisa03g2531 657 SMART preset_2 384 479 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Bisa03g2531 657 MobiDBLite consensus disorder prediction 87 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g2531 Bisa-ChrBisa03 38295462 38297435 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g2531 12 656 Su(var)3-9 homologs AT1G73100 46.657 0.0 577
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Bisa03g2531 SAD_SRA 5.8e-50 CL0178