Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g2528 ATGGAGCCAGAACGGCTTCTGCACAATGGGGATCCTCCCCGTCCTCGTCCAAGTAATCCGGCCACCATACGAGCCGCTTTCACCCTCCCCTTTTCTCGCTACACCACCCGTCTGATCGCGGCCGAGCACAATCGGATTTTCCTTGGAGACTGCACGGCGAACCCATCGGAGGACGATGACGACCGAGCTGTTGAGGATGGCAGTTGCGCCTATTCGAGGCCCATTTTGGTTCTGGACCTAGTGTGGAACCTGGCCTTCGTACTGGTCGCTGCTGGAGTGCTTCTTTCGACATCTAGGGAGCGCCCATCCACCCCTTTGAGGCTTTGGCTGTGTGGGTATGCTTTTGAGTGTGTTCTGCATATGGGTTTCGTGTATTTTGAGTATCGGAGAAGCTCTGACGACTTTCTCGGTGCTGTTGAGCTCGGGCTTCCGTTAGCTCAGAGTCGGAACAGCGCTGTGAAGAAGTTAGAGTCTATGAACACACTGGCATCATCTATTTGGTGGGTCTTTGGATTTTATTGGATTGTTGTGGGTGGCCAACAACTTTTGCAAGATTGTCCTCGTCTCTACTGGTTGACAGTTGTCTTTCTAGCCTTTGATGTATTTTTTATTATCTTTTGCATTGGGATGGTTTGTATAGTTTTCTTTGCTCTCTTCTGTTTCATCCCAATAGTAGCATTAGCTTATGCTATGAGAAGCAGAGAAGGCGCATTAGAAGAGGATATCAGGTCTCTTCCTAAGTATAAATTTAATCAGTCAAATTCATTGGTGATGGTTGATGACAGTAAGAATCAAGTAAGAATGGATGCAGGCAATAGCAACCTCAGTGAAATATATCTTAACCCAGATGATTCTGAATGCTGCATCTGCCTTTCATCATATGTAGATGGAGCGGAATTGTATCGCCTTCCCTGCACGCATCATTTTCATTGTGGATGCATTAGCAGATGGCTTAGGACAAAAGCAACCTGTCCTCTCTGCAAATTTAATATCCTCAGAGGGGACACATTGGTCTGA 1017 0.471 MEPERLLHNGDPPRPRPSNPATIRAAFTLPFSRYTTRLIAAEHNRIFLGDCTANPSEDDDDRAVEDGSCAYSRPILVLDLVWNLAFVLVAAGVLLSTSRERPSTPLRLWLCGYAFECVLHMGFVYFEYRRSSDDFLGAVELGLPLAQSRNSAVKKLESMNTLASSIWWVFGFYWIVVGGQQLLQDCPRLYWLTVVFLAFDVFFIIFCIGMVCIVFFALFCFIPIVALAYAMRSREGALEEDIRSLPKYKFNQSNSLVMVDDSKNQVRMDAGNSNLSEIYLNPDDSECCICLSSYVDGAELYRLPCTHHFHCGCISRWLRTKATCPLCKFNILRGDTLV 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g2528 338 CDD RING-H2_RNF6-like 286 328 - -
Bisa03g2528 338 ProSiteProfiles Zinc finger RING-type profile. 287 328 IPR001841 -
Bisa03g2528 338 SMART ring_2 287 327 IPR001841 -
Bisa03g2528 338 Pfam Ring finger domain 286 328 IPR001841 -
Bisa03g2528 338 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 266 332 IPR013083 -
Bisa03g2528 338 PANTHER TARGET OF ERK KINASE MPK-1 64 332 - -
Bisa03g2528 338 SUPERFAMILY RING/U-box 279 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g2528 Bisa-ChrBisa03 38220708 38226411 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g2528 70 335 C3H Transcription Factor Family AT1G68070 48.921 8.27e-92 276