Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bisa03g2500 | ATGACTTCAAGACCCGCCGTCGTTCCACAACAGGCCACAGGTGATGCATTGGTTGGGGAAGGTAAGCAGCAGAAGAAGAATGCAGCGGCGGAGGGAAGAACCCGTCGAGCACTGGGCGACATTGGAAATTTGGTGACTGTAAAAGGCGTAGAGGTCAAACCTAACCGTCCCATCACGAGGAGCTTTTGTGCCCACTTACTTGCTAATGCCCAAGCAGCCGCTGAAAACAAGAAACAGGCCGGACCTCCCGCTGTTCTTGATGGAGTTGCAGTTGCTAAAAGAGGCGTACCAAAGCCGGCTCAGAAGAAAGTCAATGTTAAACCAAAGCCTGAGGAAGTCATTGACATAAGCTCAGAAGAAGAAGAGGTTAAGAAAGAGGACAAGTCTATTAAGAAAAAGGAGGGAGATGGAAACTCGAGGAAGAACTCACGGACTCTTACTTCAGTACTCACTGCTCGAAGCAAGGCAGCATGTGGTGTCACCAAAAAACCAAAGGAGCTAATTGTTGACATAGACGCAGCTGACACTGATAATGAGCTTGCTGCTGTGGAATATATTGAAGACATTTACAAGTTTTATAAGCTGGTTGAGCATGAGAACCGTCCTCATGACTATATGGATTCACAACCTGAAGTTAATGAGAGGATGAGAGCTATCTTAGTGGACTGGCTGATAGATGTCCACACCAAGTTCGACCTTTCACTTGAAACTCTTTATCTCACCATCAACATAATTGATCGCTTCCTTGCAGTCAAGACTATTCCAAGGAGGGAACTCCAGTTGGTTGGCATCAGTGCCATGCTCATAGCATCCAAATATGAAGAAATCTGGCCACCTGAGGTTAATGACTTTGTGTGCCTCTCAGACAGAGCTTACGGTCATGAACAAATATTAGTGATGGAGAAAATCATTCTGGGCAAGCTGGAATGGACTTTGACAGTGCCTACAACTTACGTTTTCCTTGTTCGTTTCATCAAGGCATCAATTCCTGATCAGGAGTTGGAAAATATGGTATATTTTCTTTGTGAGTTAGGAGCCATGCATTATGCCACTATAATGTTTTGCTCATCAATGGTGGCTGCCTCAGCCGTCTTTGCTGCTCGATGTACTCTGAACAAGAGGCCCACTTGGAACGACACACTGAAGCTTCACACTGGATACTCAGAAGCACAATTGATGGATTGTGCTAGATTACTGGTGGACTTTCACTCCATGGCTGGGAAAGGAAAGCTTCAGGTTGTATACAGAAAGTACTCGGATCCTGAAAGAGGAGCCGTGGCCTTGCTTCCACCAGCTAGAGATCTCTTGCCTGCAGATTTTACTGCTAGAGTTTGA | 1335 | 0.4577 | MTSRPAVVPQQATGDALVGEGKQQKKNAAAEGRTRRALGDIGNLVTVKGVEVKPNRPITRSFCAHLLANAQAAAENKKQAGPPAVLDGVAVAKRGVPKPAQKKVNVKPKPEEVIDISSEEEEVKKEDKSIKKKEGDGNSRKNSRTLTSVLTARSKAACGVTKKPKELIVDIDAADTDNELAAVEYIEDIYKFYKLVEHENRPHDYMDSQPEVNERMRAILVDWLIDVHTKFDLSLETLYLTINIIDRFLAVKTIPRRELQLVGISAMLIASKYEEIWPPEVNDFVCLSDRAYGHEQILVMEKIILGKLEWTLTVPTTYVFLVRFIKASIPDQELENMVYFLCELGAMHYATIMFCSSMVAASAVFAARCTLNKRPTWNDTLKLHTGYSEAQLMDCARLLVDFHSMAGKGKLQVVYRKYSDPERGAVALLPPARDLLPADFTARV | 444 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bisa03g2500 | 444 | MobiDBLite | consensus disorder prediction | 117 | 140 | - | - | |
| Bisa03g2500 | 444 | PIRSF | Cyclin_A_B_D_E | 1 | 443 | IPR046965 | GO:0016538|GO:0044772 | |
| Bisa03g2500 | 444 | SMART | cyclin_7 | 222 | 306 | IPR013763 | - | |
| Bisa03g2500 | 444 | SMART | cyclin_7 | 319 | 401 | IPR013763 | - | |
| Bisa03g2500 | 444 | SUPERFAMILY | Cyclin-like | 314 | 432 | IPR036915 | - | |
| Bisa03g2500 | 444 | FunFam | G2/mitotic-specific cyclin-1 | 310 | 427 | - | - | |
| Bisa03g2500 | 444 | CDD | CYCLIN_AtCycB-like_rpt2 | 315 | 431 | - | - | |
| Bisa03g2500 | 444 | PANTHER | CYCLINS | 128 | 420 | IPR039361 | - | |
| Bisa03g2500 | 444 | ProSitePatterns | Cyclins signature. | 217 | 248 | IPR006671 | - | |
| Bisa03g2500 | 444 | Gene3D | - | 202 | 313 | - | - | |
| Bisa03g2500 | 444 | MobiDBLite | consensus disorder prediction | 1 | 33 | - | - | |
| Bisa03g2500 | 444 | Pfam | Cyclin, C-terminal domain | 315 | 431 | IPR004367 | - | |
| Bisa03g2500 | 444 | MobiDBLite | consensus disorder prediction | 117 | 146 | - | - | |
| Bisa03g2500 | 444 | SUPERFAMILY | Cyclin-like | 177 | 312 | IPR036915 | - | |
| Bisa03g2500 | 444 | CDD | CYCLIN_AtCycB-like_rpt1 | 165 | 310 | - | - | |
| Bisa03g2500 | 444 | SMART | Cyclin_C_2 | 315 | 432 | IPR004367 | - | |
| Bisa03g2500 | 444 | FunFam | G2/mitotic-specific cyclin | 201 | 309 | - | - | |
| Bisa03g2500 | 444 | Pfam | Cyclin, N-terminal domain | 188 | 312 | IPR006671 | - | |
| Bisa03g2500 | 444 | Gene3D | - | 188 | 427 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Bisa03g2500 | Bisa-ChrBisa03 | 37768621 | 37771350 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Bisa03g2500 | 1 | 436 | Core Cell Cycle Gene Families | AT4G37490 | 55.088 | 3.70e-154 | 442 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Bisa03g2500 | 03 | 37768621 | 37771350 | Bisa03g2500 | 03 | 37768621 | 37771350 | ECH |