Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g2498 ATGAAGTCCGGTTCATTAGATTACTGGAAGAATTACTTTCGGACGGCAAATTCGGATATATTCGATATAATTGACCATGCGATCATGGTGGCCGCTTCTGATTGTCCGAAGGAGTTTCGATTGCGAAGAGATGGAATCGCGGAACGGTTGTTTTCTTGTAGAATGACTCGCTGTTTGGGGTGTGACCGAGTTGAGTTGGCGGTGTCCCGAGTCGATGAGGAGGAAGAGGGAGGTTGTAAGAGTGGTTTTGACAGGGATGGTGGTGAAGCGGAAGCTGGTGCGAGTAAAGAGAGCAAGGCCCATAGTAGCAGAGACGATCGCGGAGAGATGAACACCAACCACGTTAGCAATTATAGCTATGGAGATGCTGAAGCATTGACTGTTGAGATTGAAGAAGAGTCTCAATTGGTTGGAGAGGTTTTCAGGATCAAAGAGATTCTCCATAACAGCGAAGAAGAGTCTGAATCGGTGTTATTTGAATCATTGAGGAGGCTCCAGTTGATGGAACTGAATGTGGATCTTCTGAAGGCAACTGAGATTGGAAAGGCTGTCAATCCTTTCCGAAAGCATGGATCAAAGGAGATTCGTCTTCTTGCACGGACGCTTATTGATGGCTGGAAAGAAATGGTGGATGAGTGGGTCAATGCGACGACAATGAATGCAGGTTCAGAAGGCACTCCAGATTCAGTAAATCCAGTAGTTGTTAATGAAGACGAAGAGGAAGAGGAAGAAGAAGAGGAAGGGCTTCCATCGCCTCCTATGGATGAAGGGGCTTTCTTTGCAGCACAACCTACTTCGATGGAATTATCACAGTTCTTTGATGGCATGGATGATGATGGAAATCCTCGACAGGGTGTGGAATTCATTATGAACCGGGAAAATGGCAGAAAACCATCCCTGGACAGTCAAAACATAGTAAAGAGGAAACAACAGGCTTCCTGCGTGACAAATGCCACTCCCAGAGACAGCAGGAGTCAGCCAATGAAGAAAAATGAGGCTGCTGTTAAGCTAAATAAATCAGTAACTGCTGATTCTGGTCCTGGCAGACCATTAAAATCAAACATGCAGCAAAGAGGCAATATGGAGCCAAAGATACAGCAAAAAGTAGACAAGAGTGGTATACGAAAGATGCCTCCTCTTGGTCAGCAACATAAATCCAAGTGTTCAGATGATGCTTCTGTTCAGATGAAGCTTGAAGCTACTAAGAGGAAACTTCAGGAGAGCTATCAACAAGCTGAAAATGCCAAGAAGCAACGGACAATACAGGTTATGGAGTTGCATGATCTCCCCAAGCAGGGCACTGGACACCGAAATCCACATTTCAAACCTATGAAGAACCATAACAGGAACTGGTCTCAGGGACGATGGTAG 1371 0.4544 MKSGSLDYWKNYFRTANSDIFDIIDHAIMVAASDCPKEFRLRRDGIAERLFSCRMTRCLGCDRVELAVSRVDEEEEGGCKSGFDRDGGEAEAGASKESKAHSSRDDRGEMNTNHVSNYSYGDAEALTVEIEEESQLVGEVFRIKEILHNSEEESESVLFESLRRLQLMELNVDLLKATEIGKAVNPFRKHGSKEIRLLARTLIDGWKEMVDEWVNATTMNAGSEGTPDSVNPVVVNEDEEEEEEEEEGLPSPPMDEGAFFAAQPTSMELSQFFDGMDDDGNPRQGVEFIMNRENGRKPSLDSQNIVKRKQQASCVTNATPRDSRSQPMKKNEAAVKLNKSVTADSGPGRPLKSNMQQRGNMEPKIQQKVDKSGIRKMPPLGQQHKSKCSDDASVQMKLEATKRKLQESYQQAENAKKQRTIQVMELHDLPKQGTGHRNPHFKPMKNHNRNWSQGRW 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g2498 456 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 129 223 IPR035441 -
Bisa03g2498 456 MobiDBLite consensus disorder prediction 76 116 - -
Bisa03g2498 456 CDD TFIIS_I 139 211 - -
Bisa03g2498 456 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 135 221 IPR035441 -
Bisa03g2498 456 MobiDBLite consensus disorder prediction 347 363 - -
Bisa03g2498 456 SMART TFS2_5 137 212 IPR003617 GO:0005634
Bisa03g2498 456 MobiDBLite consensus disorder prediction 296 324 - -
Bisa03g2498 456 Pfam TFIIS helical bundle-like domain 162 210 IPR017923 -
Bisa03g2498 456 MobiDBLite consensus disorder prediction 76 111 - -
Bisa03g2498 456 MobiDBLite consensus disorder prediction 234 251 - -
Bisa03g2498 456 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 26A-RELATED 3 443 IPR044805 -
Bisa03g2498 456 MobiDBLite consensus disorder prediction 219 257 - -
Bisa03g2498 456 MobiDBLite consensus disorder prediction 431 456 - -
Bisa03g2498 456 ProSiteProfiles TFIIS N-terminal domain profile. 138 213 IPR017923 -
Bisa03g2498 456 Coils Coil 395 422 - -
Bisa03g2498 456 MobiDBLite consensus disorder prediction 295 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g2498 Bisa-ChrBisa03 37704474 37713188 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Bisa03g2498 Med26 3.6e-10 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa03g2498 03 37704474 37713188 Bisa03g2498 03 37704474 37713188 ECH