Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g2496 ATGGCATTTCGTCCATGGGTCTTCGTGACCATAATCTGTGCAAGTCTTCTGCAACACTGCCCAAAAGCAGAGTCTTCTTCAGAATCTGATAAGATCCTTCATCTTCCTGGCCAACCAATTAATGTTACTTTTCACCAATATGGAGGCTACATTCCCGTAGATGACAAACAACACAGAGCTCTGTTTTACTACTTCGTTGAAGCAGAAACAAACCCTTCCTCTAAACCCCTTGTTCTCTGGCTCAATGGAGGTCCTGGTTGTTCATCCATAGGAGGTGGAGCTTTCACTGAACATGGCCCTTTTGTCACTAATTATGGAGAAGCTATCACAAAAAATAAGTACAAGGCCAACTTCTTGTACTTAGAATCACCAGCAGGTGTTGGATTTTCGTATTCTTCCGACATATCGTTTTTTGAAAAACTGAATGATGAAGTCACAGGACACTACGTGCCTCAACTGGCAGAGCTTATTGTAAAGAGCAAAGTGAAGATCAACCTGAAGGGAATAGCAATTGGAAATCCTCTTATGGAATTCGGAACGGATTTCAATTCAATAGATGAATACTACTGGTCTCATGGCATGATATCTGATCATACTTATAAGCTTCGAACTTCAGTTTGTAACACCTCAACAGTTATGAGACAAGCCATGAAGGGCAGTTTCACCCGGGAATGTCTCGGTGTTGTACTTGAGACCATGGAGTTACGTAACTACATTGACATGTATTATATTATTGGAGACAAATGTCTGTCTTATAATTTATCACAAGCTGCCATTCTGAGTCAAAATCTAAGGTCAAGCATGTCTCAGATTTTAAGGTCTTTAAATTTGCGAAAAGATAAGATAAATACTCTGCAGGAATCAGATTATTGTCCATTTAAAAATGCAGAGATGTACTTGAACAGAAAAGATGTGCAGAAGGCTATGCATGCTCGTCCTGTTGGAGCTACCAACTATCGTTTGTGTAGCCAGTTGGTGTCGGCCAAATATAGAGCAGAAGATAGGGAAATACCAACGATCAACACAGTGGGATGGCTTGTGAAGTCTGGCCTTCGAGCAATTGTTTATAGTGGGGATCAAGACTCTGAGGTTCCATTTATTGGGACTCGAAGATTGGTGGAAAAAGTAGGAAAGCAACTTGGACTCAAAACAACTGTGCCATATAGTGCTTGGTTTGTCGGAAAACAGGCTACAAACAGACAGTTTCTTCGCCCTCTCGGTATACCCGTTGCTGCATGTGGGCTCGCCAGCACTGAGTGGATTGTTGGAGTGATGGGACACGACAATGAAGCTAGAATGAACGGTGATCCTCTTCCCCTGCTTCTTTGTCCTCAATTCATCCACACTTGCACATATTCCGCCTCCAAAACCATGGCATTTCATCCATGGATCTTTATGGCCATAATCTGTGCATCTCTTCTGCACAATTGCTCCAAAGCAGAGTCTTCTTCAGAATCTGATAAGATACATCATTTTCCTGGCCAACCCAATGTTACTTTTCACCAATATGGAGGCTACATTCCCGTAGATGACAAAAAACACAGAGCTCTTTTTTACTATTTCGTTGAAGCAGAAACAAATCCTTCCTCCAAACCCCTTGTTCTCTGGCTCAATGGAGGTCCTGGTTGTTCATCCATAGGAGGTGGAGCTTTCACAGAACATGGTCCTTTTGTCACTAATTATGGAGAAGCTATCACAAAAAATAAGTACAGTTGGAACAGAGAGGCCAACTTTTTGTACTTAGAATCACCAGCAGGTGTTGGATTTTCGTATTCTACCGACATGTCGTTTTTTGAAAATCTGAATGATGAAGTCACAGCCCGAGACAACTTGGTGTTTCTACAACGGTGGTTCGCAAAGTACCCACAGTACAAGAACAATGATTTTTACATAATGGGGGAGAGCTATGGAGGACACTACGTGCCTCAACTTGCAGAGCTTATTGTAAAGAGCAAAGTGAAGATCAACCTGAAGGGAATAGCAATAGGAAATCCTCTTATGGAATTTGGAACGGATTTCAATTCAGTAGATGAATTCTACTGGTCTCATGGCATGATATCTGATCATACTTATAAGCTTCGAACTTCAGTTTGTAACACCTCAACAGTTATGAGACAAGCCATGAAGGGCAGTTTCACCCGGGAATGTCTCGGTGTTGTACTTGAGACCATGGAGTTACGTAACTACATTGACATGTATTATATTATTGGAGACAAGTGTCTGTCTTATAATTTATCACAAGCTGCCATTCTCAGTCAACATCTAAGGTCAAGCATGTCTCAGATTTTAAGGTCTTTAAATTTGCAAAAAGATAAGATAAATACTCTGCAGGAACTAGATGATTGTCCATTGAAAAATGCAGAGATGTACTTGAACAGAAAAGATGTGCAGAAGGCTATGCATGCTCGTCTTGTTGGAGCCACCAACTATCGTTTGTGTAGCCCGTTGGTGTCAGCTAAATATAGAGTAGAAGATAAAGAAATACCAACGATCAACACAATGGGATGGCTTGTGAAGTCTGGCCTTCAAGCAATTGTTTATAGTGGGGATCAAGACTCTGCAGTTCCATTTATTGGGACTCGAAGATTGGTGGAAAAAGTAGGAAAGCAACTTGGACTCAAAACAACTGTTCCATACAGTGCTTGGTTTGTCGGAAAACAGGTTGGAGGATGGACACAAGTGTATGGGGATGGTCTTACCTTTGCGACGATAAGAGGGGCTTCACACACCACGCCAACTACTCAACCTCACAGATCGTTTGTTTTGTTTCAAGCATTTCTTCATGGGAAACCTCTCCCTAAACTTTGA 2808 0.416 MAFRPWVFVTIICASLLQHCPKAESSSESDKILHLPGQPINVTFHQYGGYIPVDDKQHRALFYYFVEAETNPSSKPLVLWLNGGPGCSSIGGGAFTEHGPFVTNYGEAITKNKYKANFLYLESPAGVGFSYSSDISFFEKLNDEVTGHYVPQLAELIVKSKVKINLKGIAIGNPLMEFGTDFNSIDEYYWSHGMISDHTYKLRTSVCNTSTVMRQAMKGSFTRECLGVVLETMELRNYIDMYYIIGDKCLSYNLSQAAILSQNLRSSMSQILRSLNLRKDKINTLQESDYCPFKNAEMYLNRKDVQKAMHARPVGATNYRLCSQLVSAKYRAEDREIPTINTVGWLVKSGLRAIVYSGDQDSEVPFIGTRRLVEKVGKQLGLKTTVPYSAWFVGKQATNRQFLRPLGIPVAACGLASTEWIVGVMGHDNEARMNGDPLPLLLCPQFIHTCTYSASKTMAFHPWIFMAIICASLLHNCSKAESSSESDKIHHFPGQPNVTFHQYGGYIPVDDKKHRALFYYFVEAETNPSSKPLVLWLNGGPGCSSIGGGAFTEHGPFVTNYGEAITKNKYSWNREANFLYLESPAGVGFSYSTDMSFFENLNDEVTARDNLVFLQRWFAKYPQYKNNDFYIMGESYGGHYVPQLAELIVKSKVKINLKGIAIGNPLMEFGTDFNSVDEFYWSHGMISDHTYKLRTSVCNTSTVMRQAMKGSFTRECLGVVLETMELRNYIDMYYIIGDKCLSYNLSQAAILSQHLRSSMSQILRSLNLQKDKINTLQELDDCPLKNAEMYLNRKDVQKAMHARLVGATNYRLCSPLVSAKYRVEDKEIPTINTMGWLVKSGLQAIVYSGDQDSAVPFIGTRRLVEKVGKQLGLKTTVPYSAWFVGKQVGGWTQVYGDGLTFATIRGASHTTPTTQPHRSFVLFQAFLHGKPLPKL 935
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g2496 935 PRINTS Carboxypeptidase C serine protease (S10) family signature 581 591 IPR001563 GO:0004185|GO:0006508
Bisa03g2496 935 PRINTS Carboxypeptidase C serine protease (S10) family signature 899 912 IPR001563 GO:0004185|GO:0006508
Bisa03g2496 935 PRINTS Carboxypeptidase C serine protease (S10) family signature 617 642 IPR001563 GO:0004185|GO:0006508
Bisa03g2496 935 PRINTS Carboxypeptidase C serine protease (S10) family signature 568 580 IPR001563 GO:0004185|GO:0006508
Bisa03g2496 935 ProSitePatterns Serine carboxypeptidases, serine active site. 631 638 IPR018202 GO:0004185
Bisa03g2496 935 Gene3D - 291 327 - -
Bisa03g2496 935 Pfam Serine carboxypeptidase 494 929 IPR001563 GO:0004185|GO:0006508
Bisa03g2496 935 Pfam Serine carboxypeptidase 36 137 IPR001563 GO:0004185|GO:0006508
Bisa03g2496 935 Pfam Serine carboxypeptidase 147 400 IPR001563 GO:0004185|GO:0006508
Bisa03g2496 935 SUPERFAMILY alpha/beta-Hydrolases 28 393 IPR029058 -
Bisa03g2496 935 Gene3D alpha/beta hydrolase 479 932 IPR029058 -
Bisa03g2496 935 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 488 916 IPR001563 GO:0004185|GO:0006508
Bisa03g2496 935 FunFam Carboxypeptidase 482 933 - -
Bisa03g2496 935 Gene3D alpha/beta hydrolase 24 143 IPR029058 -
Bisa03g2496 935 Gene3D alpha/beta hydrolase 144 259 IPR029058 -
Bisa03g2496 935 SUPERFAMILY alpha/beta-Hydrolases 489 933 IPR029058 -
Bisa03g2496 935 Gene3D - 340 421 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g2496 Bisa-ChrBisa03 37556912 37574815 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g2496 778 932 Calmodulin-binding Proteins AT2G22960 27.097 6.85e-15 72.4