Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g2492 ATGGGGGATGCATGGGCCAACATTTGTCCATGTGATCTAGCGTCTCTACCATCTTCCTCTTTTCTGCTCGAGATGGCCAGGCGCTTGGCTCCTTTGCTTAATCGGGTTCTGGTGGAGAAAATTGTCCCTCCATCCAAAACAAACGCTGGAATTTTATTGCCGGAGAAATCCACCAAGCTGAATTCTGGGAAAGTTATTGCTGTGGGCCCTGGCATTCGTGATAAAGAGGGGAAAATAATTCCTGTGGCTTTAAAGGAAGGTGACGCTGTACTGTTACCTGAATATGGAGGAACTGAGGTGAAGCTTGGTGACAAAGAGTATCATCTATATCGAGATGACGATATACTGGGCACACTTCATGATTGA 366 0.4617 MGDAWANICPCDLASLPSSSFLLEMARRLAPLLNRVLVEKIVPPSKTNAGILLPEKSTKLNSGKVIAVGPGIRDKEGKIIPVALKEGDAVLLPEYGGTEVKLGDKEYHLYRDDDILGTLHD 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g2492 121 SMART Cpn10_2 28 119 IPR020818 GO:0005524|GO:0006457|GO:0044183
Bisa03g2492 121 Pfam Chaperonin 10 Kd subunit 29 118 IPR020818 GO:0005524|GO:0006457|GO:0044183
Bisa03g2492 121 PRINTS 10kDa chaperonin signature 29 44 IPR020818 GO:0005524|GO:0006457|GO:0044183
Bisa03g2492 121 PRINTS 10kDa chaperonin signature 85 97 IPR020818 GO:0005524|GO:0006457|GO:0044183
Bisa03g2492 121 PRINTS 10kDa chaperonin signature 106 119 IPR020818 GO:0005524|GO:0006457|GO:0044183
Bisa03g2492 121 PRINTS 10kDa chaperonin signature 50 71 IPR020818 GO:0005524|GO:0006457|GO:0044183
Bisa03g2492 121 FunFam 10 kDa chaperonin, mitochondrial 22 121 - -
Bisa03g2492 121 Gene3D GroES chaperonin 24 121 IPR037124 GO:0006457
Bisa03g2492 121 PANTHER 10 KDA HEAT SHOCK PROTEIN 26 118 IPR020818 GO:0005524|GO:0006457|GO:0044183
Bisa03g2492 121 Hamap Co-chaperonin GroES [groES]. 28 120 IPR020818 GO:0005524|GO:0006457|GO:0044183
Bisa03g2492 121 SUPERFAMILY GroES-like 27 120 IPR011032 -
Bisa03g2492 121 CDD cpn10 28 119 IPR020818 GO:0005524|GO:0006457|GO:0044183
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g2492 Bisa-ChrBisa03 37399339 37403562 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g2492 27 120 Calmodulin-binding Proteins AT5G20720 38.542 2.97e-11 56.6