Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g2488 ATGGAGAACTCTGAGCTGTACCAATTCCTCGCCGGCAACGGCTCATTCTTCAGCCCCTCGCCGTACGGCCTGCCTCCTGCAGCCACCACGATGCAGAGCTTCTGCAGTTCCTCTTATTACCCCTTAGATTCCTCCGAAATTACGGATACGCCCCAGCAAGATAGAGCCCTCGCCGCTTTGAAAAATCACAAGGAGGCCGAGAAGCGTAGAAGGGAGAGAATTAATTCTCATCTCGATAAGCTTCGCACTCTTCTCCCTTGTAATTCTAAGACAGACAAGGCCTCGCTTCTTGCAAAGGTTGTCCAGCGAGTGAGGGAGCTGAAACAGCAAACCTCGGAAATCACGGAACTCGAGACCGTTCCGTCGGAGACGGACGAGATCACGGTGCTGTCGACGAGCGGCGAATACGACGGCGATGGCAGGCTGATATTCAAGGCCTCCCTGTGCTGCGAGGATCGCTCCGACCTCATACCGGACCTCATCGAAATCCTCAAGTCTCTTCATCTCAAAACCCTCAAAGCAGAAATGGCGACCCTTGGAGGAAGAACCCGGAACGTCCTCATTGTCGCCGCCGATAAAGACCACAGCATCGAGTCCATCCACTTTCTCCAAAACGCATTGAAGTCCTTGCTAGAACGCTCCAATTCCAGCGAACGATCAAAACGACGCCGCGTTTTGGACCGTAAACTCATTGTTTAA 699 0.5293 MENSELYQFLAGNGSFFSPSPYGLPPAATTMQSFCSSSYYPLDSSEITDTPQQDRALAALKNHKEAEKRRRERINSHLDKLRTLLPCNSKTDKASLLAKVVQRVRELKQQTSEITELETVPSETDEITVLSTSGEYDGDGRLIFKASLCCEDRSDLIPDLIEILKSLHLKTLKAEMATLGGRTRNVLIVAADKDHSIESIHFLQNALKSLLERSNSSERSKRRRVLDRKLIV 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g2488 232 Gene3D - 53 119 IPR036638 GO:0046983
Bisa03g2488 232 SMART finulus 64 113 IPR011598 GO:0046983
Bisa03g2488 232 CDD bHLH_AtAIG1_like 53 129 - -
Bisa03g2488 232 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 58 107 IPR011598 GO:0046983
Bisa03g2488 232 PANTHER TRANSCRIPTION FACTOR BHLH30 46 227 IPR045847 GO:0003700|GO:0006355
Bisa03g2488 232 Pfam Helix-loop-helix DNA-binding domain 62 107 IPR011598 GO:0046983
Bisa03g2488 232 FunFam transcription factor bHLH30 53 116 - -
Bisa03g2488 232 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 62 118 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g2488 Bisa-ChrBisa03 37309892 37310988 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g2488 6 217 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G41130 66.964 1.44e-90 265
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bisa03g2488 HLH 2e-11 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa03g2488 03 37309892 37310988 Bisa03g2488 03 37309892 37310988 ECH