Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g2485 ATGTTGACACACCGACCTGTGACGTGTCCGACACGTGTCTCAGCACTATTGGAGGAAATGGTAAGAATTCAGCCACCGATTGACGTGGACAGCCATGTGGCACACAAGGCGACGTGGATGCTGACCATGCTGCAGCTGGCTGTGACAAGCCCACATTATCTTTCCCTGCACGTGGGAACCCAAATCCCCAACCCCACTGGCCCAACCGCACGTGCCAACACTGTCAATTGCAGTTTCTTGTACGTGCGAATAAGTATTTATGCGCTACCACGAGAGCGGGCAGGCCCTGATAGCTTTAGCTTCACCGGTGCAACAAAGAGTGAAAGATCTAATCATATATCTCCCCAGATATTTCCGATTCTCCAGGAAAAGAAAAAGACAGAAACTAAAAGGAGACGGTGTTTGGATATCCATTACTTTTCCGTTGCCATGCCTTACCTTGTCCGGGAGAAATTATTTATTGGTCCTATGGGTGACGCTGCGGAGATCCTTCAAAATGGTAGCGATGAAATCACGCACATTTTATCCGTTCTTAGCTCTGCTTCAATATCATCGTTTTGTGGATGGCGTAGTAGCCTAAAGATCCCCACAAAGGAAATTAAGAAGGTTTATGTTGGTGACGTTCACGGTGCTGCACCTGATGATGACTTGGGTGATATATCAAAGAGTCCGTTGTCACCCGAGAACCTCTTGTACTCGTTGGAATATGCAGGTAAAGATTTGAAGTTTGTGAGGATGGCTGTCCCTATGATGGATACAGAAAATGAGGATTTGTTGGATTATTTGGATGTTTGCCTCAATTTTATTGATCGGAGTAGAAAAGATGGTTCTGTGTTGGTGCACTGCTTTGCTGGAGTATCAAGAAGTGCAGCAATCATTACAGCATATCTGATGAGAACTGAGCGTCTATCTCAAGAAGATGCCCTTGAATCATTAAGGAAGAGTCGTGAATGTGTTTGCCCTAATGATGGTTTTCTTGAGCAGTTAAAAATGTTTGAGGAGATGGGCTTCAAGGTGGATCGGTCTAGTTCTATATACAAGCGCTTTCGTCTGAGAGTATTTGGCCAGAATTATAACTCGGGGGTGAGGATCCACAGTTCTAAATTTGGAGCTGATCCTGGCATTCCTGTTGAATTTACTTCAGAGGTGAAAAGAGCTCCAATAGTGGAAAATAAGTACAGCCCTACATATCGCTGTAAGAAGTGCCGACGGGTGGTTGCATTGAAGGAACATGTAGTAGATCATGTTCCAGGCGAGGGTGAGACATCTGGTATGTGGCAGAAGTGGACAAGTGACATCCCGTTTAACAAATCTAATGATTCTGAGTGTTCGTCCTTATTTGTTGAGCCACTACTGTGGATGAAAGCTGTTGTGGAAGGTGCATCAGAGGGGAAATTGTCATGTGCTCATTGTGACGCTCGTTTGGGAAGCTTCAATTGGTTAGGCATACAATGCAGCTGTGGAAGGTGGATAACCCCAGCCTTTCAGATCCACAAGGGCCGAGTGGATGTAAGCCCTATCTAA 1524 0.4547 MLTHRPVTCPTRVSALLEEMVRIQPPIDVDSHVAHKATWMLTMLQLAVTSPHYLSLHVGTQIPNPTGPTARANTVNCSFLYVRISIYALPRERAGPDSFSFTGATKSERSNHISPQIFPILQEKKKTETKRRRCLDIHYFSVAMPYLVREKLFIGPMGDAAEILQNGSDEITHILSVLSSASISSFCGWRSSLKIPTKEIKKVYVGDVHGAAPDDDLGDISKSPLSPENLLYSLEYAGKDLKFVRMAVPMMDTENEDLLDYLDVCLNFIDRSRKDGSVLVHCFAGVSRSAAIITAYLMRTERLSQEDALESLRKSRECVCPNDGFLEQLKMFEEMGFKVDRSSSIYKRFRLRVFGQNYNSGVRIHSSKFGADPGIPVEFTSEVKRAPIVENKYSPTYRCKKCRRVVALKEHVVDHVPGEGETSGMWQKWTSDIPFNKSNDSECSSLFVEPLLWMKAVVEGASEGKLSCAHCDARLGSFNWLGIQCSCGRWITPAFQIHKGRVDVSPI 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g2485 507 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 148 338 IPR029021 -
Bisa03g2485 507 Gene3D Protein tyrosine phosphatase superfamily 147 355 IPR029021 -
Bisa03g2485 507 Pfam Dual specificity phosphatase, catalytic domain 239 334 IPR000340 GO:0008138|GO:0016311
Bisa03g2485 507 ProSitePatterns Tyrosine specific protein phosphatases active site. 280 290 IPR016130 GO:0016311|GO:0016791
Bisa03g2485 507 SMART dsp_5 144 335 IPR020422 GO:0006470|GO:0008138
Bisa03g2485 507 FunFam Dual specificity protein phosphatase 12-like 147 355 - -
Bisa03g2485 507 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE 12 FAMILY MEMBER 144 503 - -
Bisa03g2485 507 ProSiteProfiles Dual specificity protein phosphatase domain profile. 144 338 IPR020422 GO:0006470|GO:0008138
Bisa03g2485 507 CDD DSP_DUSP12 147 340 - -
Bisa03g2485 507 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 259 316 IPR000387 GO:0016311|GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g2485 Bisa-ChrBisa03 37185480 37191302 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g2485 243 334 Protein tyrosine phosphatase (PTP) family AT3G06110 41.935 1.54e-18 81.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa03g2485 03 37185480 37191302 Bisa03g2485 03 37185480 37191302 ECH