Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g2471 ATGTCGTTGGACGACTCTCTGAGATCTCTATCGATGGACTACCTGAACCTGCTGATCAACGGGCAGGCCTTCAGCGACGTGACGTTCAGCGTGGAGGGTCGTTTGGTTCACGCGCACCGCTGCATCCTGGCGGCCCGGAGCCTGTTCTTCCGGAAGTACTTCTGCGGACCAGAGCCCCCGGGCGGGCTGGACCCTGGCCCCGCCTCCCGGCCCAGCTCGGGCTCCTCCGCCTCCAGACCGGGGGTCATCCCCGTGAACTCCGTGGGCTACGAAGTTTTTTTACTCCTGCTTCAGTTTCTCTACAGTGGCCAGGTCTCTATTGTGCCTCAGAAGCACGAGCCCAGGCCTAATTGCGGCGAAAGGGGCTGCTGGCACACGCATTGCACCTCCGCCGTTGATCTCGCCCTCGACACTCTCGCTGCCGCTAGATCCTTCGGCGTTGAACAGCTCGCATTGCTCACTCAGAAACAATTAGCGAGCATGGTAGAGAAGGCCTCCATTGAAGACGTAATGAAAGTGCTTCTAGCTTCAAGAAAGCAAGACATGCACCAACTCTGGACCACTTGTTCTCATCTCGTCGCCAAATCGGGTCTTCCGCCGGAAGTTCTGGCCAAACACCTGCCCATTGACGTCGTCGCAAAGATTGAGGAGCTCCGTCTCAAGACCTCCCTCGCCCGCCGCACCCTCCTCCCCCACCACCACCACCACCACCACCACGCCCACGCCGACCACCTCGACCTCGAAGACCAGAAAATCCGCCGAATGCGGCGGGCTCTCGACTCCTCCGACGTCGAGCTCGTCAAGCTCATGGTCATGGGGGAAGGCCTAAATCTCGACGAAGCACTGGCCCTACACTACGCCGTCGAGAATTGCAGCCGAGAAGTCGTCAAAGCCCTGCTGGAGCTCGGCGCTGCCGACGTCAACTACCCGGCCGGCCCAGCTGGGAAGACCCCACTCCACATTGCTGCCGAGATGGTGTCGCCGGACATGGTGGCCGTCCTCCTCGACCACCACGCCGACCCCAACGTCCGAACCGTGGACGGCGTGACCCCTCTCGATATCCTCCGAACCCTAACCTCGGACTTCCTCTTCAAAGGGGCCGTCCCTGGGCTCACCCACATCGAACCCAACAAGCTCAGACTCTGCTTAGAGCTCGTTCAATCCGCAGCGCTCGTGATGTCACGTGAGGAAGGTAATGCCAATCCTCCTTCTTCGACGCCCATATATCCCCCAATGAGCGAAGATCATAACAATAATAGCAATAACAGTAATGTTGGGAACCTCAACTTGGACGCGAGGTTGGTATATCTGAATCTCGGCGCAACGACGTCGTCCGGGCCCATGGGTGGTTCAAGATTGGACGGAGACGAGGATAGCAGCCACAATAGGTCGCAAGGTGGATGTGACCCAACAATGTACCACCACTCTCATGACTTTCATTAG 1443 0.587 MSLDDSLRSLSMDYLNLLINGQAFSDVTFSVEGRLVHAHRCILAARSLFFRKYFCGPEPPGGLDPGPASRPSSGSSASRPGVIPVNSVGYEVFLLLLQFLYSGQVSIVPQKHEPRPNCGERGCWHTHCTSAVDLALDTLAAARSFGVEQLALLTQKQLASMVEKASIEDVMKVLLASRKQDMHQLWTTCSHLVAKSGLPPEVLAKHLPIDVVAKIEELRLKTSLARRTLLPHHHHHHHHAHADHLDLEDQKIRRMRRALDSSDVELVKLMVMGEGLNLDEALALHYAVENCSREVVKALLELGAADVNYPAGPAGKTPLHIAAEMVSPDMVAVLLDHHADPNVRTVDGVTPLDILRTLTSDFLFKGAVPGLTHIEPNKLRLCLELVQSAALVMSREEGNANPPSSTPIYPPMSEDHNNNSNNSNVGNLNLDARLVYLNLGATTSSGPMGGSRLDGDEDSSHNRSQGGCDPTMYHHSHDFH 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g2471 480 FunFam regulatory protein NPR5 isoform X1 4 195 - -
Bisa03g2471 480 Pfam BTB/POZ domain 16 110 IPR000210 GO:0005515
Bisa03g2471 480 Pfam Ankyrin repeats (3 copies) 262 344 IPR002110 GO:0005515
Bisa03g2471 480 SMART BTB_4 25 162 IPR000210 GO:0005515
Bisa03g2471 480 ProSiteProfiles Ankyrin repeat profile. 314 346 IPR002110 GO:0005515
Bisa03g2471 480 Gene3D Potassium Channel Kv1.1; Chain A 5 195 IPR011333 -
Bisa03g2471 480 ProSiteProfiles BTB domain profile. 25 109 IPR000210 GO:0005515
Bisa03g2471 480 MobiDBLite consensus disorder prediction 443 480 - -
Bisa03g2471 480 Pfam Domain of unknown function (DUF3420) 197 256 IPR024228 -
Bisa03g2471 480 Gene3D - 246 362 IPR036770 -
Bisa03g2471 480 SUPERFAMILY Ankyrin repeat 273 357 IPR036770 -
Bisa03g2471 480 SUPERFAMILY POZ domain 9 191 IPR011333 -
Bisa03g2471 480 CDD BTB_POZ_NPR_plant 8 162 - -
Bisa03g2471 480 PANTHER BTB/POZ DOMAIN AND ANKYRIN REPEAT-CONTAINING PROTEIN NH5.2 1 479 IPR044284 GO:0099402
Bisa03g2471 480 MobiDBLite consensus disorder prediction 410 426 - -
Bisa03g2471 480 ProSiteProfiles Ankyrin repeat region circular profile. 314 344 - -
Bisa03g2471 480 MobiDBLite consensus disorder prediction 396 426 - -
Bisa03g2471 480 SMART ANK_2a 314 343 IPR002110 GO:0005515
Bisa03g2471 480 SMART ANK_2a 279 309 IPR002110 GO:0005515
Bisa03g2471 480 FunFam regulatory protein NPR5 isoform X2 245 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g2471 Bisa-ChrBisa03 37003327 37005574 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Bisa03g2471 BTB 1.6e-14 CL0033
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa03g2471 03 37003327 37005574 Bisa07g3035 07 64213312 64215718 CCT
Bisa03g2471 03 37003327 37005574 Bisa03g2471 03 37003327 37005574 ECH