Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g2445 ATGAGCTCGTCAGAGTCTAAGTCTTTACCCTTTAGATCTAAGGAGCCTCATCTGCAGCCCTCAGCCCCCAAATCCCAATCAGAAGACCCCATTTCGTTGAGCTCCAAAACCCCAGAGAAGGCACCACAGCTCTCACACCGTTTACGAAACCGTGGCGTCGCGCTCTCCATCAAAGAAGTCCGGAAGGTTACTGAAAGCCTTCAGGAGCAGAATCGCGAGCACCAAAATCATGACCGGACTGTGCAGATCAAATCCACCAGAAGGAAGATTGATGCGTTGTTCGCTGAAACCGCACCCCCTAAATCCAAATCTGCTGTTGACGAGCCCGTCAAGCTGCCGGAAAAGTATCAAATTCTGGGTGAGTTCTTTGATAGCTTGGATAGCTCGATTAGATTGTTGCAACTGAAAGGTTCGGCTACAACTTTCAGGAATATCTGCCCTAAGATTGAATGCTTAACTGATAGGAGGTTTACACATGGTCATCTAGCCCAGTTGAAATATATCTTACCTGAGGCAGTTGTTGTAAAGAAGGTACTCAGGTTTGATGAACGGACAAGTTGTATGAAGCCAGACCTCCATGTTACTTTAAATCCAGTTACAATGGAATCTGATTCAAAATTGCTCTGTGAAGGCGGGAATGTGTCTGTGAGGAAGTTATTTTGGACACGGCTAAGAGATTTTTATAAATCACATCCTAAGGGTGATGAAATCCCAGAAGAAATCCTGCCCGAGCCATTCAATCACACTATGCAAAACCATCTTTTGGAAACATTGAGAAATCCCTCCGCATCATTTGCTACAAAGATATCATATGATACAATTGCATCTCAGCATCCAGCTGCAGCAACTGCAAGCATGCAGGATAATACCATCGCAGAAAATTCAGAGCTTGGTGAGGAAGATAACTTGTCAGTACCTGAAACAAAGTCAACTGAAGCACATAATCAGCAGCCCTCAGTGGCCACTCATGTGTCTCAATCTTTTAAAAGGCGCTTTTCTCAGAAATCTATGAGAAATGACGCAGATGGTGCCCACCAAAAGTTACCATCAGATTCATTCCATCCTCAAGTTATTCAAGTTTCAGAGTCAAGCCTGAAGAAAAATTCAGCAAGTATAGATATTATATCTCATCCTAATATTTGTCCTATAACATGTGCTTCTCCAGCTCATCTCAAAACATCTGGTGCGACACTTGCCACTCCGAAGAAATGCAGTGAGTATGCGGAGAAGGAAGATGGGTCTTTTAGAGACATTGCTGCCACGTCTACTCCAGCTAAACTTGTTTCTACTCCATCTAGGCTGATGAGTGTTACACCTTCATTGCGTCCACCTAGGAGATGTTGCATGAGCCCCAACGACAGCTCCTCCAGCTCACCAAACAAGTTGGTTAGGCACCCACCACGATCGAGGTCATTGAAATTTGACACTCCAGTGAAAAATCAAGAAATAGACAATGAAGCTGATGATGCTGGTGGCCTATCAATTAATGATGACATTTTTGATATTCTACCAGAGAATCTCCTTCAATCGATTAGAATAAAGGAGGGAATAGCAATGGAGGAAAGAAATCCAGCTATCTCACAAGCAAAGAGACGGCAGAAAATGATAGCCAGCCTCCCTAAGCTATTTAACATGATTCATCTCTTGATTCATTCAATTAACCGATCTGTTATCACAAAAGAGGAGCTTCTAAGCAAGATAATCTCAAGCCATTGTGATATAGTTGACAGAAGAGAAGTTGAAGAGCAGATGAATTTGTTGCTAGAACTAGTTCCAGAATGGATTTCTGAGAAGTTGGCATCTAGCGGGGACTTGCTATTCCGGACTTCGATTGACTTCAGTAGGTCCAGGATTTGGTCTGATCTGTTGATTTTAACTTATCTACCCATATTTAGTAATGTGTCGAATGGTGCACCTATGAAGCTTTTCTGGCAGAATGAATCCATTTTAGCCCTGAAACATGCTTCTTTGCCTTCCATTAGAAATGTCGATTTCTAA 1998 0.4279 MSSSESKSLPFRSKEPHLQPSAPKSQSEDPISLSSKTPEKAPQLSHRLRNRGVALSIKEVRKVTESLQEQNREHQNHDRTVQIKSTRRKIDALFAETAPPKSKSAVDEPVKLPEKYQILGEFFDSLDSSIRLLQLKGSATTFRNICPKIECLTDRRFTHGHLAQLKYILPEAVVVKKVLRFDERTSCMKPDLHVTLNPVTMESDSKLLCEGGNVSVRKLFWTRLRDFYKSHPKGDEIPEEILPEPFNHTMQNHLLETLRNPSASFATKISYDTIASQHPAAATASMQDNTIAENSELGEEDNLSVPETKSTEAHNQQPSVATHVSQSFKRRFSQKSMRNDADGAHQKLPSDSFHPQVIQVSESSLKKNSASIDIISHPNICPITCASPAHLKTSGATLATPKKCSEYAEKEDGSFRDIAATSTPAKLVSTPSRLMSVTPSLRPPRRCCMSPNDSSSSSPNKLVRHPPRSRSLKFDTPVKNQEIDNEADDAGGLSINDDIFDILPENLLQSIRIKEGIAMEERNPAISQAKRRQKMIASLPKLFNMIHLLIHSINRSVITKEELLSKIISSHCDIVDRREVEEQMNLLLELVPEWISEKLASSGDLLFRTSIDFSRSRIWSDLLILTYLPIFSNVSNGAPMKLFWQNESILALKHASLPSIRNVDF 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g2445 665 CDD Cdt1_m 95 247 IPR014939 -
Bisa03g2445 665 Gene3D - 496 622 IPR038090 -
Bisa03g2445 665 MobiDBLite consensus disorder prediction 449 464 - -
Bisa03g2445 665 CDD Cdt1_c 502 606 IPR032054 -
Bisa03g2445 665 Pfam DNA replication factor CDT1 like 112 238 IPR014939 -
Bisa03g2445 665 PANTHER DNA REPLICATION FACTOR CDT1 10 609 IPR045173 GO:0003677|GO:0030174|GO:0071163
Bisa03g2445 665 Coils Coil 57 77 - -
Bisa03g2445 665 MobiDBLite consensus disorder prediction 308 332 - -
Bisa03g2445 665 FunFam CDT1-like protein a chloroplastic 496 624 - -
Bisa03g2445 665 Pfam DNA replication factor Cdt1 C-terminal domain 506 598 IPR032054 -
Bisa03g2445 665 MobiDBLite consensus disorder prediction 19 41 - -
Bisa03g2445 665 MobiDBLite consensus disorder prediction 429 473 - -
Bisa03g2445 665 MobiDBLite consensus disorder prediction 297 353 - -
Bisa03g2445 665 MobiDBLite consensus disorder prediction 333 347 - -
Bisa03g2445 665 SUPERFAMILY "Winged helix" DNA-binding domain 108 246 IPR036390 -
Bisa03g2445 665 SMART CDT1_2 112 244 IPR014939 -
Bisa03g2445 665 MobiDBLite consensus disorder prediction 1 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g2445 Bisa-ChrBisa03 36558966 36565038 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g2445 421 606 Core DNA Replication Machinery Family AT2G31270 51.795 3.22e-48 176