Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g2380 ATGGCTTCCTCTTCCTCTGATCCTGGCAAGTCGGAAGCTGGCGGGGGCGGAGGCGGAGAGGCTTCGGAAGCAGTGATGGCCAATGATCAGCTCTTACTGTATAGAGGATTGAAGAAAGCAAAGAAAGAAAGAGGCTGTACAGCCAAAGAGCGCATCAGCAAGATGCCTCCTTGTGCAGCAGGAAAACGCAGCTCCATATACCGCGGTGTGACCAGGCATAGATGGACGGGTCGTTATGAAGCCCATCTTTGGGATAAAAGTACATGGAACCAGAATCAGAATAAAAAAGGAAAGCAAGGGGCTTATGATGACGAAGAGGCTGCAGCAAGAGCATATGACCTTGCCGCTCTGAAATACTGGGGTCCAGGAACTCTCATTAATTTTCCGGTGACTGATTATAGAAGAGATCTTGAAGAAATGCAGAATGTTTCAAGGGAGGAATACCTTGCATCTTTACGGCGGAAGAGCAGTGGTTTTTCAAGAGGAATCTCAAAATATCGTGGACTCTCCAGTCGATGGGAGCCATATGGTCGTATGGCTGGATCTGACTACTTCAACAGTATACATTATGGTACAGGTGACGATTCAGCAGCAGAAAGTGAACATGTGAGTGGTTTCTGCATAGAAAGAAAGATTGATTTAACAAGTTACATCAAGTGGTGGGGATCTAATAAAATTCGCCAACCTGATGCTGGAACAAAATTTTCAGAAGGAAAAAAACATGGATTTGCTGGAGATATTTGTGGTGAGCTTAAATCATTGGAAGAGGAACTCCAACCCACTGAGCCATACCAAATGCCGCAGTTAGGCCTGCCACATGATGGGAAAAAGCATAAAAGTTCTGCAGTCTCTGCCTTAAGTATCTTATCACGATCAGCAGCCTACAATAGTCTGCAAGAGAAGGCGTCAAAGAGACAAGAAAACTACACTGATAATGATGAGGATGAAAACAAAGATAACATCAATAAGTTGGATCATGGCAAGGCAGTTGAGAAATCATCAAATCATGATGGAGCTGATGAAAGGCTTGACATTGCAATGGGAATGAGTGGGGCATTGTCTATTCAAAGAAATGTTTACCCATTGACTTCATTCTTATCTGCACCGCTTTTGACAGCCTACAATACCGTTGATCCCTTAGTAGATCCTGTTCTCTGGACATCTCTTGTTCCTATGCTTCCTGCTGGCCTTTCTCGTACAGCTGAGGTCACAGAGACCGAAATCAGTTCAACTTATACCATGTTTCAGCCAGACAAGTAA 1260 0.4429 MASSSSDPGKSEAGGGGGGEASEAVMANDQLLLYRGLKKAKKERGCTAKERISKMPPCAAGKRSSIYRGVTRHRWTGRYEAHLWDKSTWNQNQNKKGKQGAYDDEEAAARAYDLAALKYWGPGTLINFPVTDYRRDLEEMQNVSREEYLASLRRKSSGFSRGISKYRGLSSRWEPYGRMAGSDYFNSIHYGTGDDSAAESEHVSGFCIERKIDLTSYIKWWGSNKIRQPDAGTKFSEGKKHGFAGDICGELKSLEEELQPTEPYQMPQLGLPHDGKKHKSSAVSALSILSRSAAYNSLQEKASKRQENYTDNDEDENKDNINKLDHGKAVEKSSNHDGADERLDIAMGMSGALSIQRNVYPLTSFLSAPLLTAYNTVDPLVDPVLWTSLVPMLPAGLSRTAEVTETEISSTYTMFQPDK 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g2380 419 Pfam AP2 domain 66 121 IPR001471 GO:0003700|GO:0006355
Bisa03g2380 419 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 29 302 - -
Bisa03g2380 419 FunFam AP2-like ethylene-responsive transcription factor 65 131 - -
Bisa03g2380 419 SUPERFAMILY DNA-binding domain 65 130 IPR016177 GO:0003677
Bisa03g2380 419 SMART rav1_2 66 135 IPR001471 GO:0003700|GO:0006355
Bisa03g2380 419 MobiDBLite consensus disorder prediction 1 22 - -
Bisa03g2380 419 PRINTS Ethylene responsive element binding protein signature 67 78 IPR001471 GO:0003700|GO:0006355
Bisa03g2380 419 PRINTS Ethylene responsive element binding protein signature 111 131 IPR001471 GO:0003700|GO:0006355
Bisa03g2380 419 MobiDBLite consensus disorder prediction 304 339 - -
Bisa03g2380 419 ProSiteProfiles AP2/ERF domain profile. 66 129 IPR001471 GO:0003700|GO:0006355
Bisa03g2380 419 Gene3D AP2/ERF domain 66 131 IPR036955 GO:0003700|GO:0006355
Bisa03g2380 419 MobiDBLite consensus disorder prediction 299 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g2380 Bisa-ChrBisa03 35152395 35156696 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g2380 25 417 AP2-EREBP Transcription Factor Family AT2G41710 62.347 1.47e-159 456
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bisa03g2380 AP2 2.1e-09 CL0081