Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g2353 ATGTCAAATTCAACTTCCTCCAATGTGTTTGTTAATATGGGCATGAATGTGTACCCTAACCAAGTTTCAGACTTAGAGAAGAGGGAAGAGTACCATTTGACCCCCAAAGATGGGAACATCCAAAGTGACATTGTATTATTAAATAGAAATCCTCTGAAGTTAATTGAATCTTCAAATATTCCTAAAATGGAAGTAGTAAATATGGATCATTCTTCTCCTATTAGAGTGGCTGTTGATTCTATAGTATTTGCACGTCTTCCATACTTAAATGCTTCTGCATTATTAGTAGCTTCGGAAGTTCCAACTCCCAAGTCCCAACAACACCAGCCTCATTTCTCAAATCCCCTCTCTGCGCTTCAAATTTCTGTTTTCTGCAATTTGAGGGTGAGAAAGATGGCGCTCAATATGCACACCACTTGCTTCTCCTCCTTCTCTATGACAAATCCTACTAGCCTTCGAAGGACCTCTTCTCTTCTGCCATCTGCTAAACAACTAGTTGGTCTTCCCTTGGCTTCATCAACAACCTCCAAGCTGCCTCTGCAATTTGTTTCCAGGAATTCTACTAACAGACCCATTAAATGTTCCGTTTCTGAAGCTACGGAACCCAAAACTGAGAAGAAGAGACAGTTGTCGAGAAGAAGTGACATAAGAAATATAGCAATTGTAGCTCATGTTGATCATGGAAAAACAACTTTAGTTGATGCGATGCTGAAACAAACAAAGGTATTTCGTGATAATCAATCTGTACAGGAAAGAATAATGGACTCAAATGATTTGGAGCGTGAAAGAGGAATTACAATACTAAGTAAAAATACATCTATCACCTATAAAGACACCAAGATTAATATCATAGATACTCCAGGTCACTCGGACTTCGGAGGTGAAGTGGAGCGCATACTAAATATGGTGGAAGGAGTCCTTTTAGTGGTAGACTCTGTTGAAGGCCCAATGCCACAGACAAGATTTGTTTTAAAGAAGGCTCTAGAGTTTGGTCATGCAGTAGTTGTTGTTGTTAATAAAATCGATAGACCTTCTGCTCGTCCAGACTTTGTCATTAACTCCACTTTTGAACTCTTTCTTGAACTGAATGCAACAGATGAACAGTGTGACTTCCAAGTAATATATGCAAGTGGCATAAAAGGACAGGCAGGACTGTCTCCCGAAAATTTGGCGGAAGATCTTGGGCCATTGTTTGAAGCCATAATCAGATGCATCCCTGGACCACATATTGATAAAGATGGTGCACTACAAATGCTTGCTACAAATATTGAGTATGATGAACATAAAGGGCGTATAGCAATTGGCCGCTTGCAAGCTGGAGTTTTACAAAGAGGCATGGAAGTAAAGGTATGTACTTCAGAAGATTCATGTAGATACGGAAGAGTTAGTGAGCTTTTTGTGTATGACAAATTCAGTAGGGTCCCTGCAGAGAGTGTAGAGGCTGGTGATATATGTGCTGTATGTGGAATTGCTGATATTCAGATTGGGGAAACAATTGCTGACAAAGTATTTGGTAAGCCGCTGCCAACCATCAGGGTGGAAGAACCAACAGTGAAAATGTCTTTCTCCATAAACACGTCACCTTTTGTTGGGCGTGAGGGAAAGTATGTTACTAGTCGGAATTTAAGGGATAGGCTCAGTCGTGAACTTGAACGAAATCTGGCCATGAGAGTCGAAGATGGTGAAACTGCAGATACATTTATTGTCAGTGGCCGTGGTACTTTGCATATAACCATACTCATAGAAAATATGCGAAGAGAAGGATATGAATTCATGGTAGGTCCTCCAAAAGTTATCAACAAGAAAGTGAATGACCAATTGATGGAACCATATGAGATTGCTACCGTGGAGGTACCAGAAGAACACATGGGGGCTGTCGTTGAACTTTTGGGCAAGAGACGAGGGCAAATGTTTGATATGGAAGGAGTTGGATCGGAAGGAACTACACTATTGAAGTATAAGATCCCGACACGTGGCCTTCTTGGATTGCGGAATTCTATTTTAACTGCTTCCCGTGGAACAGCAGTTCTTAACACTATTTTTGACAACTATGGGCCTTGGGCTGGAGATATTAATACACGGGATCAAGGCTCACTGGTTGCTTTTGAGGATGGAACAAGTACTTCATATGCGCTTGCTAACTCACAGGAGAGAGGACAGATGTTTATTGGCCCTGGAGTTGAAGTTTACAAAGGTCAAATTGTCGGCATCCATCAGCGACCTGGGGATTTGGCCTTAAATGTTTGCAAGAAAAAAGCTGCAACAAACATACGTTCCAACAAGGAACAAACAGTGGTTCTTGATACACCATTGGATTATAGTCTGGATGACTGCATCGAATACATCCAAGAAGACGAGCTAGTCGAGGTCACTCCCAAGAGTATCCGGATGTGCAAGAATCCGAAATTCGCAAAGAAAACGAGGTAG 2427 0.4133 MSNSTSSNVFVNMGMNVYPNQVSDLEKREEYHLTPKDGNIQSDIVLLNRNPLKLIESSNIPKMEVVNMDHSSPIRVAVDSIVFARLPYLNASALLVASEVPTPKSQQHQPHFSNPLSALQISVFCNLRVRKMALNMHTTCFSSFSMTNPTSLRRTSSLLPSAKQLVGLPLASSTTSKLPLQFVSRNSTNRPIKCSVSEATEPKTEKKRQLSRRSDIRNIAIVAHVDHGKTTLVDAMLKQTKVFRDNQSVQERIMDSNDLERERGITILSKNTSITYKDTKINIIDTPGHSDFGGEVERILNMVEGVLLVVDSVEGPMPQTRFVLKKALEFGHAVVVVVNKIDRPSARPDFVINSTFELFLELNATDEQCDFQVIYASGIKGQAGLSPENLAEDLGPLFEAIIRCIPGPHIDKDGALQMLATNIEYDEHKGRIAIGRLQAGVLQRGMEVKVCTSEDSCRYGRVSELFVYDKFSRVPAESVEAGDICAVCGIADIQIGETIADKVFGKPLPTIRVEEPTVKMSFSINTSPFVGREGKYVTSRNLRDRLSRELERNLAMRVEDGETADTFIVSGRGTLHITILIENMRREGYEFMVGPPKVINKKVNDQLMEPYEIATVEVPEEHMGAVVELLGKRRGQMFDMEGVGSEGTTLLKYKIPTRGLLGLRNSILTASRGTAVLNTIFDNYGPWAGDINTRDQGSLVAFEDGTSTSYALANSQERGQMFIGPGVEVYKGQIVGIHQRPGDLALNVCKKKAATNIRSNKEQTVVLDTPLDYSLDDCIEYIQEDELVEVTPKSIRMCKNPKFAKKTR 808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g2353 808 Pfam Elongation factor Tu GTP binding domain 215 406 IPR000795 GO:0003924|GO:0005525
Bisa03g2353 808 SUPERFAMILY Translation proteins 362 508 IPR009000 -
Bisa03g2353 808 Pfam Elongation factor Tu domain 2 430 499 IPR004161 GO:0005525
Bisa03g2353 808 CDD TypA_BipA 215 408 IPR047041 -
Bisa03g2353 808 Gene3D - 600 693 - -
Bisa03g2353 808 Gene3D Elongation Factor G (Translational Gtpase), domain 3 517 800 - -
Bisa03g2353 808 SMART EFG_C_a 606 695 IPR000640 -
Bisa03g2353 808 CDD BipA_TypA_II 416 509 IPR047042 -
Bisa03g2353 808 Gene3D Translation factors 410 510 - -
Bisa03g2353 808 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 205 417 IPR027417 -
Bisa03g2353 808 FunFam GTP-binding protein TypA 600 693 - -
Bisa03g2353 808 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 214 409 IPR000795 GO:0003924|GO:0005525
Bisa03g2353 808 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 688 801 - -
Bisa03g2353 808 FunFam GTP-binding protein TypA 410 510 - -
Bisa03g2353 808 PRINTS GTP-binding elongation factor signature 334 343 IPR000795 GO:0003924|GO:0005525
Bisa03g2353 808 PRINTS GTP-binding elongation factor signature 262 270 IPR000795 GO:0003924|GO:0005525
Bisa03g2353 808 PRINTS GTP-binding elongation factor signature 218 231 IPR000795 GO:0003924|GO:0005525
Bisa03g2353 808 PRINTS GTP-binding elongation factor signature 282 292 IPR000795 GO:0003924|GO:0005525
Bisa03g2353 808 Pfam Elongation factor G C-terminus 606 692 IPR000640 -
Bisa03g2353 808 SUPERFAMILY EF-G C-terminal domain-like 609 724 IPR035647 -
Bisa03g2353 808 SUPERFAMILY EF-G C-terminal domain-like 514 598 IPR035647 -
Bisa03g2353 808 NCBIfam translational GTPase TypA/BipA 216 803 IPR006298 GO:0003924|GO:0005525
Bisa03g2353 808 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 255 270 IPR031157 -
Bisa03g2353 808 Gene3D - 213 409 IPR027417 -
Bisa03g2353 808 NCBIfam small GTP-binding protein domain 216 349 IPR005225 GO:0005525
Bisa03g2353 808 CDD BipA_TypA_C 609 688 IPR035651 -
Bisa03g2353 808 CDD BipA_III 516 594 IPR047043 -
Bisa03g2353 808 FunFam GTP-binding protein TypA 213 409 - -
Bisa03g2353 808 Gene3D bipa protein 694 773 IPR042116 -
Bisa03g2353 808 FunFam GTP-binding protein TypA 517 623 - -
Bisa03g2353 808 FunFam GTP-binding protein TypA 694 780 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g2353 Bisa-ChrBisa03 34513406 34522031 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g2353 216 343 Eukaryotic Initiation Factors Gene Family AT3G22980 43.846 4.50e-24 107