Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g2335 ATGGATTCTTGCAGAAAGTCCCCTTTAAAGCCATGGAAGAAAGGGCCAAGCAGGGGGAAAGGTGGCCCTCAGAATGCTTCGTGTGAGTATCGAGGGGTTCGTCAGAGAACATGGGGGAAATGGGTTGCTGAGATAAGGGAGCCAAAGAAGAGAACCAGACTGTGGCTTGGGTCTTATGCCACAGCTGAAGAAGCTGCCATGGCTTATGATGAAGCTGCAAGGAGACTCTATGGACCGGATGCTTACCTTAATCTTCCCCTCCTTCAACCCTCCTCCAATTCTCCTATCAAATCCCAAAAGTTCAAATGGTTGCCTTCCAAGAATTTCATTTCAATGTTTCCTCCTTGTGGATTGCTCAATGTCAATGCTCAACCTAGTGTTCATGTAATCCATCAGAGGCTACAACAACTCAAGCAGAATGAGGTTCAAAGTCGAACTCCTAGTTCATCCTGTGATCCTAAGGCTGAACTCCAGAGTATGATAGGCTGCAAACATGGTGGAGAAGATCCTTTAAAGGAAAAAGATGCTAAAACATCATCAGAAAAGATGCTTGGAGATATTCAGGAGAAACCCCAGATTGATCTTCATGAGTTTCTTCAACAGCTGGGAGTGCTGAAAAATGAAAAGCAGTCAGAAGTAACTGATAGCTCAGGGAGTTCCACAGAGCCTGAACCTTTATCAACAAACTACGGTGATAAATTTGGAGAACATTCTGACAATAGTGTTAACTGGGAGGAATTGATCGAGATGCACGGAATTGCCGATAATCAGGGATCAGAATCAAACCAGTTTCAAGCATATGACATAAATGATGACGGGCTTACTTTCTCCCCTTCAATTTGGGACTTCTAA 852 0.4401 MDSCRKSPLKPWKKGPSRGKGGPQNASCEYRGVRQRTWGKWVAEIREPKKRTRLWLGSYATAEEAAMAYDEAARRLYGPDAYLNLPLLQPSSNSPIKSQKFKWLPSKNFISMFPPCGLLNVNAQPSVHVIHQRLQQLKQNEVQSRTPSSSCDPKAELQSMIGCKHGGEDPLKEKDAKTSSEKMLGDIQEKPQIDLHEFLQQLGVLKNEKQSEVTDSSGSSTEPEPLSTNYGDKFGEHSDNSVNWEELIEMHGIADNQGSESNQFQAYDINDDGLTFSPSIWDF 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g2335 283 Gene3D AP2/ERF domain 29 87 IPR036955 GO:0003700|GO:0006355
Bisa03g2335 283 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 4 248 - -
Bisa03g2335 283 MobiDBLite consensus disorder prediction 166 182 - -
Bisa03g2335 283 PRINTS Ethylene responsive element binding protein signature 30 41 IPR001471 GO:0003700|GO:0006355
Bisa03g2335 283 PRINTS Ethylene responsive element binding protein signature 52 68 IPR001471 GO:0003700|GO:0006355
Bisa03g2335 283 FunFam Ethylene-responsive transcription factor 2 28 87 - -
Bisa03g2335 283 Pfam AP2 domain 28 78 IPR001471 GO:0003700|GO:0006355
Bisa03g2335 283 MobiDBLite consensus disorder prediction 161 182 - -
Bisa03g2335 283 MobiDBLite consensus disorder prediction 207 227 - -
Bisa03g2335 283 CDD AP2 28 86 IPR001471 GO:0003700|GO:0006355
Bisa03g2335 283 ProSiteProfiles AP2/ERF domain profile. 29 86 IPR001471 GO:0003700|GO:0006355
Bisa03g2335 283 SMART rav1_2 29 92 IPR001471 GO:0003700|GO:0006355
Bisa03g2335 283 MobiDBLite consensus disorder prediction 207 238 - -
Bisa03g2335 283 SUPERFAMILY DNA-binding domain 29 87 IPR016177 GO:0003677
Bisa03g2335 283 MobiDBLite consensus disorder prediction 1 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g2335 Bisa-ChrBisa03 34235234 34236085 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g2335 5 283 AP2-EREBP Transcription Factor Family AT3G57600 52.650 2.20e-88 263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bisa03g2335 AP2 1.8e-14 CL0081