Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bisa03g2329 | ATGGCTGACCCTTTCTCCAATTTTTACTTCCATTTCCACCATTTCCCTTCTCCCCATAATTCTTCTTCTTCTTCTTCTTCTTCTTCCTCTTCTTCTTCTTCTTCTTCCTCGAATCCTCCCTTCCTCCGTAACTTCCTCGCCACCACCGCCGCCGCCACAAACAGCAACAACAACGGTTATTTCCACTGTCACCAAATCTCCTCTTATAATTCTTCTTGTTCTTGTTCTACACCTTCAACCTCACCCCCTTCTCCTCCTCTCAGAGAAGCCCTCCCTCTCCTCAGCCTCACCCCCACCACCCACATGGAGGAGAGGGTGGTGATCCCCAAGAAGGAAAAACAAGAAGAAGAACAAGAGGGAGAGGAAGACGAAGAAGAAGATGTTGAAGAGCATGATGAGAGCAGTGTGACTGTTGCACTCCACATAGGGTTGCCAAGCCCTAGTGCTGCTGAGATGGCGTCTCTCCTCTCTTCTTCTTCCAACAATAATTCCTCATCACTCCATGACCACAAAGAGCAACATCAGTTAGATGGGGATGGTGGTGATGACGATCATGAGGAGGATTGCTCTGGGTTCATGCATCTCCACAATAAGCTCAACAAGGGTCAGTACTGGATCCCTACCCCCTCCCAGATTCTCATTGGCCCTACCCAGTTCTCTTGCCCTGTTTGCTTCAAGACCTTCAACAGATACAACAACATGCAGATGCATATGTGGGGGCACGGATCACAATACAGAAAGGGTCCAGAGTCGCTTCGTGGGACACAGCCGACGGGGATGCTGAGGCTGCCATGCTACTGCTGTGCGCCGGGGTGCAGGAACAACATCGACCATCCTCGAGCGAAGCCATTGAAGGACTTCAGGACGCTGCAGACGCACTACAAGAGGAAGCACGGGATCAAGCCCTTCATGTGCAGGAAGTGCGGGAAGGCTTTTGCTGTGAGAGGAGACTGGAGGACCCACGAGAAGAACTGCGGGAAGCTCTGGTATTGCATATGTGGGTCGGACTTCAAGCACAAGAGGTCCCTCAAGGACCATATCAAGGCCTTCGGGACTGGCCATGCGGCTTATGGCGTCGATGGGTTCGAGGAGGAAGAAGAGCCTGCCTCTGAAGTAGAGCAAGACAACGAGTCCAACCAGTAA | 1143 | 0.5162 | MADPFSNFYFHFHHFPSPHNSSSSSSSSSSSSSSSSSNPPFLRNFLATTAAATNSNNNGYFHCHQISSYNSSCSCSTPSTSPPSPPLREALPLLSLTPTTHMEERVVIPKKEKQEEEQEGEEDEEEDVEEHDESSVTVALHIGLPSPSAAEMASLLSSSSNNNSSSLHDHKEQHQLDGDGGDDDHEEDCSGFMHLHNKLNKGQYWIPTPSQILIGPTQFSCPVCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTGMLRLPCYCCAPGCRNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLKDHIKAFGTGHAAYGVDGFEEEEEPASEVEQDNESNQ | 380 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bisa03g2329 | 380 | SMART | c2h2final6 | 219 | 241 | IPR013087 | - | |
Bisa03g2329 | 380 | SMART | c2h2final6 | 303 | 323 | IPR013087 | - | |
Bisa03g2329 | 380 | MobiDBLite | consensus disorder prediction | 96 | 136 | - | - | |
Bisa03g2329 | 380 | FunFam | Zinc finger protein WIP2 | 272 | 354 | - | - | |
Bisa03g2329 | 380 | Gene3D | Classic Zinc Finger | 218 | 241 | - | - | |
Bisa03g2329 | 380 | MobiDBLite | consensus disorder prediction | 151 | 166 | - | - | |
Bisa03g2329 | 380 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 303 | 323 | IPR013087 | - | |
Bisa03g2329 | 380 | MobiDBLite | consensus disorder prediction | 151 | 189 | - | - | |
Bisa03g2329 | 380 | SUPERFAMILY | beta-beta-alpha zinc fingers | 288 | 323 | IPR036236 | - | |
Bisa03g2329 | 380 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 219 | 246 | IPR013087 | - | |
Bisa03g2329 | 380 | Coils | Coil | 111 | 131 | - | - | |
Bisa03g2329 | 380 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 221 | 241 | IPR013087 | - | |
Bisa03g2329 | 380 | FunFam | zinc finger protein WIP2-like | 218 | 241 | - | - | |
Bisa03g2329 | 380 | Coils | Coil | 372 | 380 | - | - | |
Bisa03g2329 | 380 | PANTHER | ZINC FINGER PROTEIN WIP2 | 14 | 377 | IPR043584 | GO:0003700|GO:0010468 | |
Bisa03g2329 | 380 | MobiDBLite | consensus disorder prediction | 17 | 39 | - | - | |
Bisa03g2329 | 380 | MobiDBLite | consensus disorder prediction | 117 | 132 | - | - | |
Bisa03g2329 | 380 | Gene3D | Classic Zinc Finger | 281 | 357 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Bisa03g2329 | Bisa-ChrBisa03 | 34108488 | 34110226 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Bisa03g2329 | 1 | 380 | C2H2 Transcription Factor Family | AT3G57670 | 60.539 | 3.33e-147 | 420 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2H2 | Bisa03g2329 | None | None | None |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Bisa03g2329 | 03 | 34108488 | 34110226 | Bisa07g3109 | 07 | 65358872 | 65361067 | CCT | |
Bisa03g2329 | 03 | 34108488 | 34110226 | Bisa03g2329 | 03 | 34108488 | 34110226 | ECH |