Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g2329 ATGGCTGACCCTTTCTCCAATTTTTACTTCCATTTCCACCATTTCCCTTCTCCCCATAATTCTTCTTCTTCTTCTTCTTCTTCTTCCTCTTCTTCTTCTTCTTCTTCCTCGAATCCTCCCTTCCTCCGTAACTTCCTCGCCACCACCGCCGCCGCCACAAACAGCAACAACAACGGTTATTTCCACTGTCACCAAATCTCCTCTTATAATTCTTCTTGTTCTTGTTCTACACCTTCAACCTCACCCCCTTCTCCTCCTCTCAGAGAAGCCCTCCCTCTCCTCAGCCTCACCCCCACCACCCACATGGAGGAGAGGGTGGTGATCCCCAAGAAGGAAAAACAAGAAGAAGAACAAGAGGGAGAGGAAGACGAAGAAGAAGATGTTGAAGAGCATGATGAGAGCAGTGTGACTGTTGCACTCCACATAGGGTTGCCAAGCCCTAGTGCTGCTGAGATGGCGTCTCTCCTCTCTTCTTCTTCCAACAATAATTCCTCATCACTCCATGACCACAAAGAGCAACATCAGTTAGATGGGGATGGTGGTGATGACGATCATGAGGAGGATTGCTCTGGGTTCATGCATCTCCACAATAAGCTCAACAAGGGTCAGTACTGGATCCCTACCCCCTCCCAGATTCTCATTGGCCCTACCCAGTTCTCTTGCCCTGTTTGCTTCAAGACCTTCAACAGATACAACAACATGCAGATGCATATGTGGGGGCACGGATCACAATACAGAAAGGGTCCAGAGTCGCTTCGTGGGACACAGCCGACGGGGATGCTGAGGCTGCCATGCTACTGCTGTGCGCCGGGGTGCAGGAACAACATCGACCATCCTCGAGCGAAGCCATTGAAGGACTTCAGGACGCTGCAGACGCACTACAAGAGGAAGCACGGGATCAAGCCCTTCATGTGCAGGAAGTGCGGGAAGGCTTTTGCTGTGAGAGGAGACTGGAGGACCCACGAGAAGAACTGCGGGAAGCTCTGGTATTGCATATGTGGGTCGGACTTCAAGCACAAGAGGTCCCTCAAGGACCATATCAAGGCCTTCGGGACTGGCCATGCGGCTTATGGCGTCGATGGGTTCGAGGAGGAAGAAGAGCCTGCCTCTGAAGTAGAGCAAGACAACGAGTCCAACCAGTAA 1143 0.5162 MADPFSNFYFHFHHFPSPHNSSSSSSSSSSSSSSSSSNPPFLRNFLATTAAATNSNNNGYFHCHQISSYNSSCSCSTPSTSPPSPPLREALPLLSLTPTTHMEERVVIPKKEKQEEEQEGEEDEEEDVEEHDESSVTVALHIGLPSPSAAEMASLLSSSSNNNSSSLHDHKEQHQLDGDGGDDDHEEDCSGFMHLHNKLNKGQYWIPTPSQILIGPTQFSCPVCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTGMLRLPCYCCAPGCRNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLKDHIKAFGTGHAAYGVDGFEEEEEPASEVEQDNESNQ 380
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g2329 380 SMART c2h2final6 219 241 IPR013087 -
Bisa03g2329 380 SMART c2h2final6 303 323 IPR013087 -
Bisa03g2329 380 MobiDBLite consensus disorder prediction 96 136 - -
Bisa03g2329 380 FunFam Zinc finger protein WIP2 272 354 - -
Bisa03g2329 380 Gene3D Classic Zinc Finger 218 241 - -
Bisa03g2329 380 MobiDBLite consensus disorder prediction 151 166 - -
Bisa03g2329 380 ProSiteProfiles Zinc finger C2H2 type domain profile. 303 323 IPR013087 -
Bisa03g2329 380 MobiDBLite consensus disorder prediction 151 189 - -
Bisa03g2329 380 SUPERFAMILY beta-beta-alpha zinc fingers 288 323 IPR036236 -
Bisa03g2329 380 ProSiteProfiles Zinc finger C2H2 type domain profile. 219 246 IPR013087 -
Bisa03g2329 380 Coils Coil 111 131 - -
Bisa03g2329 380 ProSitePatterns Zinc finger C2H2 type domain signature. 221 241 IPR013087 -
Bisa03g2329 380 FunFam zinc finger protein WIP2-like 218 241 - -
Bisa03g2329 380 Coils Coil 372 380 - -
Bisa03g2329 380 PANTHER ZINC FINGER PROTEIN WIP2 14 377 IPR043584 GO:0003700|GO:0010468
Bisa03g2329 380 MobiDBLite consensus disorder prediction 17 39 - -
Bisa03g2329 380 MobiDBLite consensus disorder prediction 117 132 - -
Bisa03g2329 380 Gene3D Classic Zinc Finger 281 357 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Bisa03g2329 Bisa-ChrBisa03 34108488 34110226 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g2329 1 380 C2H2 Transcription Factor Family AT3G57670 60.539 3.33e-147 420
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bisa03g2329 None None None
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa03g2329 03 34108488 34110226 Bisa07g3109 07 65358872 65361067 CCT
Bisa03g2329 03 34108488 34110226 Bisa03g2329 03 34108488 34110226 ECH