Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g2317 ATGGAGCAAGCTACAGGAGGTTTATCTGAATCCAGTCTCAATGTTCGCGATCACGATCAGACGGCTTTTGAATCCATCCAATTCAACGAGGAAATCCAGCGTATCATAGCCCCAACCCCGGAAAACGCGGGTTCATTCACTGCGCTTCTCGAACTTCCACCAATGCAAGCCATGGAGCTCCTTCACTCGCCGAACTGTGACGGAGCCGTCGCCTCCGGGGAACCCTTAAATGATATCAACAACCAGAAATATCTATTCCACTCTTTCAATCGCAATTTAGCTTTCCCTTCTAACGCTACTTTGATCGAGCGCGCCGCCATGTTTTCCGTGCCTAACGAACAGAACTCGCTACCGGAGGAGGCCAGCTTGGCTCCACTTAATTCGAGTGCAAGTTTAAATACAGTGAAGAATGAACCCCCAGAAGCCGATTCGAATCCTAGTTCAACCCAGGGATTCGTTTGTAATGCCGCAATCGAGGGCAAGAACGAGAGGGCCGCAAAGAGAAAGGAGCGAGAGAAGAAGGTCAAGGGGTCCTCAAAGAAGAGTAAAAGCGTCGCCGACGAGACATCCGGAGATGGTGAGAAACTTCCCTACGTTCATGTTCGAGCTCGTCGTGGTCAAGCTACAGACAGCCATAGCTTAGCAGAAAGGGCCAGAAGAGAGAAGATAAACGCTCGTATGAAGCTTTTGCAAGAACTGGTCCCCGGCTGCAATAAGATTTCAGGAACAGCATTGGTTCTGGATGAAATCATCAACCACGTTCAATTTCTTCAACGTCAAGTGGAGTTCTTATCAATGAAACTAGCAGCAGTTAACCCCACAATTGATTTCGACCTTGACAGCATAATGGCTACTGGAGGTCCATATCTTATGGACAGCAACTTTTCCGGCATGGTCACGCCTCTAATGTGGCCAGAAGTCCCAGTCAATGGAAACAGGCAGCAATATCAACAACAGTGGCAATCTGATGCATTCAACCAACCAATTTGGGGTAGGGGAGAAGAGAACCACAATTTCATGACCCCAGAAAACTCCCTGTTAAGTTATGGCTCATCGGCAAATTCAGGTACATCAGAGTTAAACTTCTGTTGCATATGTCTCCTTCCTAAAGATTCCACACAAAATAGTATTTAA 1134 0.4727 MEQATGGLSESSLNVRDHDQTAFESIQFNEEIQRIIAPTPENAGSFTALLELPPMQAMELLHSPNCDGAVASGEPLNDINNQKYLFHSFNRNLAFPSNATLIERAAMFSVPNEQNSLPEEASLAPLNSSASLNTVKNEPPEADSNPSSTQGFVCNAAIEGKNERAAKRKEREKKVKGSSKKSKSVADETSGDGEKLPYVHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCNKISGTALVLDEIINHVQFLQRQVEFLSMKLAAVNPTIDFDLDSIMATGGPYLMDSNFSGMVTPLMWPEVPVNGNRQQYQQQWQSDAFNQPIWGRGEENHNFMTPENSLLSYGSSANSGTSELNFCCICLLPKDSTQNSI 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g2317 377 MobiDBLite consensus disorder prediction 131 196 - -
Bisa03g2317 377 SMART finulus 213 263 IPR011598 GO:0046983
Bisa03g2317 377 MobiDBLite consensus disorder prediction 131 155 - -
Bisa03g2317 377 Pfam Helix-loop-helix DNA-binding domain 211 258 IPR011598 GO:0046983
Bisa03g2317 377 MobiDBLite consensus disorder prediction 161 196 - -
Bisa03g2317 377 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 205 275 IPR036638 GO:0046983
Bisa03g2317 377 CDD bHLH_AtBPE_like 197 282 - -
Bisa03g2317 377 Gene3D - 204 276 IPR036638 GO:0046983
Bisa03g2317 377 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 207 257 IPR011598 GO:0046983
Bisa03g2317 377 FunFam transcription factor bHLH48-like isoform X1 204 276 - -
Bisa03g2317 377 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 118 345 IPR024097 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g2317 Bisa-ChrBisa03 33881292 33885861 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g2317 5 340 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G57800 51.507 1.02e-93 283
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bisa03g2317 HLH 2.6e-05 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa03g2317 03 33881292 33885861 Bisa03g2317 03 33881292 33885861 ECH