Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g2300 ATGGGGTTTTGGAGAGCTATTGGAGGAAAACCAGAAGAAGAAGAGGTAGAGACAGAGACAAAGGCTTCTACAGGTCCCTCTCTGATCATGGCTTACAACAAGACCACCAACCAAACCACCACTCAGCTGGAACCACTCCCACTCCGACCTCCTCCACATCGTCATCATCCTCAAATCTCTTTTGGAATGAATATGATGCAATCTTCTTCTTCCTCCTCCATCCCCGGAAATTACCTAAGCAATGATTCGGGAGCTTATGATTTAGGTGAATTAGATCAAGCCCTTCTTCTGTATCTCGATGGACAACCCGACCCCTCCAACAATCTTCAAGATCAAAGACAGAACTCATCGTCGTCAGGAATGAGGCCTCCCACTCTCAACATTTTCCCATCGCAGCCAATGCACGTAGACCCACCTTCGTCTAAGGCGAGCATGGAGCTAGTTTCACCCCAAAGCAGTGGTTCCAAGAGACCATCTGAGCCGTCCGTGGAATTGGCCAATCCACGGACAGAAGCCGCCTCCGCACCTGAATCTGCCAAAGCTGTTAAGCGAGAGGGCACTCGCAAGGGTCCGACTTCAAGCTCTGAACAGGAAGGACCCAAAACACCTGATCCTAAGACACTCAGAAGACTTGCTCAGAATAGAGAGGCGGCTAGGAAAAGCAGGCTTAGGAAAAAGGCATATGTGCAGCAGTTAGAATCAAGTAGGATCAGGTTGAATCAGCTGGAGCAAGAGTTGCAGCGTGCTAGAGCTCAGGGCATATTTCTCGGAGGATCGGGTGGGCTTTTGGGAGAAGAGCAAGGCCTTCCTGTGGCTATGAGTAGCATTAGCTCAGATGCTGCAATGTTCGACGTGGAATATGGGAGATGGGTGGAGGAGCACCATAGGCTGGTGTGCGAGCTGAGAGCCGCAGTGCAAGAGCACCTTCCCGAGAACGAGCTTAGGCTGTTCGTGGACAATTGTCTAGCCCACTATGACCAAGTCTTGAACCTCAAGAGCATTGTGGCTAAAACAGACGTATTCCACCTTGTTTCTGGCATGTGGAAGACCCCAGCTGAACGTTGCTTCATGTGGATCGGTGGATTCAAGCCCTCTGAACTCATCAAGATTATTCTAAACCACATAGAGCCCCTCACGGAGCAACAAATACTGGGTATCTGCGGGTTGCAACAATCTACGCAAGAGGCAGAAGAAGCTCTCTCCCAGGGACTTGAAGCTCTGAGTCAATCTCTCTCAGACACCATAACATCTGACTCACTAAGCTGTCCCCCCAATATGGCTCACTACATGGGACAGATGGCCATGGCCATGAACAAGCTCTCCACTCTCGAAGGTTTCGTCAGACAGGCGGATAGCCTTCGGCACCAGACGATTCACCGTCTGCATCAGATCCTAACGACGCGCCAAGCTGCGAGGTGCTTGCTGGCCATGGCTGAGTACACCCACCGTCTGCGAGCCCTGAGCTCTCTCTGGCTCGCACGCCCTCGCCAAGAATAG 1497 0.5144 MGFWRAIGGKPEEEEVETETKASTGPSLIMAYNKTTNQTTTQLEPLPLRPPPHRHHPQISFGMNMMQSSSSSSIPGNYLSNDSGAYDLGELDQALLLYLDGQPDPSNNLQDQRQNSSSSGMRPPTLNIFPSQPMHVDPPSSKASMELVSPQSSGSKRPSEPSVELANPRTEAASAPESAKAVKREGTRKGPTSSSEQEGPKTPDPKTLRRLAQNREAARKSRLRKKAYVQQLESSRIRLNQLEQELQRARAQGIFLGGSGGLLGEEQGLPVAMSSISSDAAMFDVEYGRWVEEHHRLVCELRAAVQEHLPENELRLFVDNCLAHYDQVLNLKSIVAKTDVFHLVSGMWKTPAERCFMWIGGFKPSELIKIILNHIEPLTEQQILGICGLQQSTQEAEEALSQGLEALSQSLSDTITSDSLSCPPNMAHYMGQMAMAMNKLSTLEGFVRQADSLRHQTIHRLHQILTTRQAARCLLAMAEYTHRLRALSSLWLARPRQE 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g2300 498 MobiDBLite consensus disorder prediction 100 209 - -
Bisa03g2300 498 SUPERFAMILY Leucine zipper domain 206 248 IPR046347 GO:0003700|GO:0006355
Bisa03g2300 498 Coils Coil 225 252 - -
Bisa03g2300 498 Pfam bZIP transcription factor 206 239 IPR004827 GO:0003700|GO:0006355
Bisa03g2300 498 Pfam Seed dormancy control 298 372 IPR025422 GO:0006351|GO:0043565
Bisa03g2300 498 PANTHER TRANSCRIPTION FACTOR TGA9 118 497 - -
Bisa03g2300 498 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 204 248 IPR004827 GO:0003700|GO:0006355
Bisa03g2300 498 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 209 224 IPR004827 GO:0003700|GO:0006355
Bisa03g2300 498 ProSiteProfiles DOG1 domain profile. 280 494 IPR025422 GO:0006351|GO:0043565
Bisa03g2300 498 MobiDBLite consensus disorder prediction 144 160 - -
Bisa03g2300 498 SMART brlzneu 202 265 IPR004827 GO:0003700|GO:0006355
Bisa03g2300 498 FunFam BZIP family transcription factor 205 254 - -
Bisa03g2300 498 CDD bZIP_HBP1b-like 206 255 - -
Bisa03g2300 498 MobiDBLite consensus disorder prediction 103 126 - -
Bisa03g2300 498 MobiDBLite consensus disorder prediction 1 25 - -
Bisa03g2300 498 Gene3D - 205 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g2300 Bisa-ChrBisa03 33616334 33622449 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g2300 76 498 Basic region leucine zipper (bZIP) Transcription Factor Gene Family AT5G06839 63.514 0.0 547
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Bisa03g2300 DOG1 1.9e-30 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa03g2300 03 33616334 33622449 Bisa07g3130 07 65800943 65806653 CCT