LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bisa03g2297	ATGGTTTGCACGTACCATTATGTGCATCTCAGTATCATTGTCTTATCGGCCGTTTTGACTTCTCGGGGTTTAGCATCTACTGATCCTGCTGAAGTCGCAGCTCTCCGAGATCTATACAAGACCTTGAACAATCCGCCGGCCCTGAAAGGATGGGATATTGGAGATCCTTGTGAGGAATCTTGGACAGGAGTAGCTTGTTCTGCGTCATCAGTTATACACCTTAAAATTCCAGGATTGAATCTCACCGGGCATCTTGGAGGTCAGCTCCATAATCTACACAATTTGAAGCAACTTGATGTCAGCTCCAACAAAATAGACGGTGAAATACCATTTGGCTTACCCCCCAATGCCACACATATAAATATGGCTTGCAACAATTTGAGCCAAAATATTCCCCACTCATTACCTATCATGAAAAAACTACGACATCTGAACCTAAGCCACAATTTCTTATCTGGACCAATTGGCAATGTTTTTACTGGCCTAGATAATCTCAAAGAGATGGACCTTTCATATAACAATTTCTCAGGAGATCTACCAAGTTCATTTGGTTCCTTGAAAAACCTTAATAGATTATTCCTGCAAAATAACAATTTCACTGGATCCGTTACGTATCTGGCTGAACTTCCACTTACAGATTTGAACATTCAAGATAATCTGTTTAGCGGCATTATTCCTCACCATTTTCAGTCCATACCAAATTTATGGATTGGAAGGAATAAATTCCATGGAGAAGGAGAAGCCAATTCTCCTCCCTGGGATTTTCCTTTGGAGACTGTACCAATAGTGCATAATATCAGTCGCCCACCCACGACTCAGGCAAATGCCATCGAGAACTATTCCTCTCACAAAGTAAGTCGGCACAAGAAGAAACGTATGGGTCCTCGAGGAATAGCTGTTATGGTTGGAGGAGGGACGCTAATTGCTACAGGTGTGGCACTCTTCATTGCAATCCGTTTGAATCGATTGAATGGGCGGAGACTCAAGAGCTTAGAAAGCAGCCATAGCTCATTGCACTCTCATCCAACCACCGCAACCATAGAAGTCTCTTCTACAGCACTGGAAGAAAGCCCACGAATCCCGCCATTTAATTCTTCATCCCTTCTGGGTCCAAGGCGATTACCTCCCCTGTACCATAAAAGAACAGAGGATCCGTCAAGAAGAAGTTTTTCCAAAAGATGCAGATTCTCCGGAAGGACAACAGTTTATACTGTGGGAGAGCTTCAGTTAGCTACAAACAGTTTCGATGAAGACAATTTTCTCGGGAAGGGATCTCTCGGTCCTGTTTACAGAGCTGTGTTTCCAGATGGCCAAAATTTGGCTGTGAAGAATATCAACATGGCGGGTCAGTCTTTCCGTGAAGAGGAAAAGTTTCTGGATGTCATTTCCACCGCTTCCCGTCTGAGGCACCCCAACATCGTAGCGCTTAATGGTTATTGCTTGGAGCACGGGCAGCATCTTCTTGTCTACGATTTTGTTAGAAATTTAACGCTGCGCGATGCTCTTCACAGTAATGCATACAAGCCTCTATCGTGGGCCCTCCGTCTTCGGGTTGCCCTTGGTGTTGCTCAGGCTCTGGACTATTTGCACTCTTCGTTCTCCCCTCCTGTCGCCCACGGCAGCTTGAAGGCTGCCAATATCCTACTTGACGAAAATCTGATACCTCGTATCTGTGACAGTGGCCTAGCTATTTTGAGACCGCTGACAGCCACCAAAGTCAAAGGTTCTGAAATTGCAAGTGGAGATGGAGGCTACATTGCCCCTGACCATGGCCAACCAGGAACTGTCAGCACAACGAGTGACGTCTATGCCTTTGGAGTGTTGCTTCTGGAACTGTTAACGGGAAGGAAACCTTTTGATGAATCGAGGCCATGGGAGGAACAATATCTGGCCAAATGGGCATCATCGAGGCTTCATGACAGCGACAGTTTGGAACGGATGGTGGATCCGGGAATTCAAAAGACAGTGCCACCCAAGGCGCTTTCCCGTTTCGCTGATATCGTCTCCCTCTGCATACAGCCTGTGAAGGAATTCCGACCTCCAATGTCAGAGGTGGTGGACTCTCTGATATCTTTCACACAAAAGCTCAACACAAGCGATGGTACCGACTTGGATCCATTGGACCGGTCTTTCCGTTCAACCGCTACCCGCTTTGTAGGTTCACCCGCTTTGAGCTATGTATCTGCCTGA	2190	0.4616	MVCTYHYVHLSIIVLSAVLTSRGLASTDPAEVAALRDLYKTLNNPPALKGWDIGDPCEESWTGVACSASSVIHLKIPGLNLTGHLGGQLHNLHNLKQLDVSSNKIDGEIPFGLPPNATHINMACNNLSQNIPHSLPIMKKLRHLNLSHNFLSGPIGNVFTGLDNLKEMDLSYNNFSGDLPSSFGSLKNLNRLFLQNNNFTGSVTYLAELPLTDLNIQDNLFSGIIPHHFQSIPNLWIGRNKFHGEGEANSPPWDFPLETVPIVHNISRPPTTQANAIENYSSHKVSRHKKKRMGPRGIAVMVGGGTLIATGVALFIAIRLNRLNGRRLKSLESSHSSLHSHPTTATIEVSSTALEESPRIPPFNSSSLLGPRRLPPLYHKRTEDPSRRSFSKRCRFSGRTTVYTVGELQLATNSFDEDNFLGKGSLGPVYRAVFPDGQNLAVKNINMAGQSFREEEKFLDVISTASRLRHPNIVALNGYCLEHGQHLLVYDFVRNLTLRDALHSNAYKPLSWALRLRVALGVAQALDYLHSSFSPPVAHGSLKAANILLDENLIPRICDSGLAILRPLTATKVKGSEIASGDGGYIAPDHGQPGTVSTTSDVYAFGVLLLELLTGRKPFDESRPWEEQYLAKWASSRLHDSDSLERMVDPGIQKTVPPKALSRFADIVSLCIQPVKEFRPPMSEVVDSLISFTQKLNTSDGTDLDPLDRSFRSTATRFVGSPALSYVSA	729

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bisa03g2297	729	FunFam	Protein STRUBBELIG-RECEPTOR FAMILY 8	380	492	-	-
	Bisa03g2297	729	SUPERFAMILY	L domain-like	31	236	-	-
	Bisa03g2297	729	ProSiteProfiles	Protein kinase domain profile.	415	693	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Bisa03g2297	729	MobiDBLite	consensus disorder prediction	333	384	-	-
	Bisa03g2297	729	SUPERFAMILY	Protein kinase-like (PK-like)	389	689	IPR011009	-
	Bisa03g2297	729	FunFam	protein STRUBBELIG-RECEPTOR FAMILY 3	28	254	-	-
	Bisa03g2297	729	Gene3D	Ribonuclease Inhibitor	28	266	IPR032675	-
	Bisa03g2297	729	FunFam	Leucine-rich repeat receptor-like protein kinase	493	700	-	-
	Bisa03g2297	729	Gene3D	Phosphorylase Kinase; domain 1	379	492	-	-
	Bisa03g2297	729	Gene3D	Transferase(Phosphotransferase) domain 1	494	712	-	-
	Bisa03g2297	729	PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED	391	695	-	-
	Bisa03g2297	729	Pfam	Leucine rich repeat N-terminal domain	30	67	IPR013210	-
	Bisa03g2297	729	Pfam	Leucine Rich Repeat	140	159	IPR001611	GO:0005515
	Bisa03g2297	729	Pfam	Leucine Rich Repeat	164	186	IPR001611	GO:0005515
	Bisa03g2297	729	Pfam	Protein tyrosine and serine/threonine kinase	419	689	IPR001245	GO:0004672\|GO:0006468
	Bisa03g2297	729	MobiDBLite	consensus disorder prediction	335	364	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bisa03g2297	Bisa-ChrBisa03	33519082	33523939	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bisa03g2297	10	729	Strubbelig Receptor Gene Family	AT5G06820	54.003	0.0	741

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-V	Bisa03g2297		PK_Tyr_Ser-Thr	1.3e-35	CL0016