Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g2295 ATGGGTTCATCCTCTGAGACCAACTCCTCCTCTGAGCTGCTTGACGGGTTGAAATTCGGCCAGACAATCTATTTTGAGGATCTGGGTCTCGGAGCTCCGGCCAAATCCAGTGCCGGTGGGGGATCCTCCGCTTCAGGGTCTGGGATGAAGAAGGGGAGAGGTGGTGCTGTTCAAGGAGCTCAGCCTCCGAGGTGTCAGGTCGAGGGCTGTAAAGTGGATCTGAGTGATGCTAAGGCTTACTATTCCAGGCATAAAGTCTGCATTATGCACTCTAAATCCCCTAGGGTCATTGTCGCTGGTCTGGAGCAAAGGTTTTGCCAACAGTGTAGCAGATTTCATCAGCTTCCTGAATTTGATCAAGAAAAACGAAGTTGCCGTAGGCGACTTGCAGGCCATAATGAACGTCGGCGAAAGCCCCCATCCAGTTCCTTATTGATCTCTCCCTATGGTAGACTCTCTTCACCTAGCCGTGATAACAGAGGAAGAGTTGACAGCTTTCTAATGGAATTTGCTGCATACCGAAAGCCTTCTCGAAGGAATGAGTTTTCGACCTTGAGATCATCTGAGCAAGTTCCAAGAAATCAAACCTCACCACCTCCCTTGGAGGGCAACTTGGAGTATCCGTCTGAACTTTCCTTGCAAGGTTCAGTGGGTGGGATAAGCTACCCTGATCTTGGACATCCTCCAGGGGAAAGCTTTGCAGGAATCACAGAGACAAATTGTGCTCTCTCTCTTCTGTCATATCAAACATGGTGCCCCAGAAACAGAGCACCAAGTCTTGGGGTGAACGACTTATATTTTGGAGGGACTCCCATGACACAATCCGCATCTTCTCATGGTGCTGCCATCCATCAACTTTCAAATGCTCCATGGTGTTTTAAAGGCATTGAAGCTGGTGATCATTCACATGTGGCTGTCCCTGATCTAGTTCTGGGTCAGATTTCGCCACCACTTGCTGATCAACATCCTGGTGAGCTTGTTGTGCCACAACCGGACCAGAGGTATGTGGATCTAGAGCAGTCCAGGGCCTATGAGTCTTCTCAGCTTATGAATTGGTCACTTTAA 1065 0.4911 MGSSSETNSSSELLDGLKFGQTIYFEDLGLGAPAKSSAGGGSSASGSGMKKGRGGAVQGAQPPRCQVEGCKVDLSDAKAYYSRHKVCIMHSKSPRVIVAGLEQRFCQQCSRFHQLPEFDQEKRSCRRRLAGHNERRRKPPSSSLLISPYGRLSSPSRDNRGRVDSFLMEFAAYRKPSRRNEFSTLRSSEQVPRNQTSPPPLEGNLEYPSELSLQGSVGGISYPDLGHPPGESFAGITETNCALSLLSYQTWCPRNRAPSLGVNDLYFGGTPMTQSASSHGAAIHQLSNAPWCFKGIEAGDHSHVAVPDLVLGQISPPLADQHPGELVVPQPDQRYVDLEQSRAYESSQLMNWSL 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g2295 354 MobiDBLite consensus disorder prediction 34 63 - -
Bisa03g2295 354 Pfam SBP domain 65 138 IPR004333 GO:0003677
Bisa03g2295 354 ProSiteProfiles Zinc finger SBP-type profile. 62 139 IPR004333 GO:0003677
Bisa03g2295 354 FunFam Squamosa promoter-binding-like protein 14 56 126 - -
Bisa03g2295 354 Gene3D - 55 126 IPR036893 GO:0003677|GO:0005634
Bisa03g2295 354 MobiDBLite consensus disorder prediction 129 158 - -
Bisa03g2295 354 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 32 293 IPR044817 GO:0003677
Bisa03g2295 354 MobiDBLite consensus disorder prediction 179 204 - -
Bisa03g2295 354 MobiDBLite consensus disorder prediction 183 202 - -
Bisa03g2295 354 SUPERFAMILY SBT domain 63 143 IPR036893 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g2295 Bisa-ChrBisa03 33509853 33513452 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g2295 17 354 SBP-box Gene Family AT2G42200 41.732 5.05e-60 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Bisa03g2295 SBP 4.2e-32 No_clan