Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g2292 ATGAACGAGAACAAGATTGATTTTCAGCCTGCTCGAGGACTAACTGGGGATTCTACTAATTCCGAGTTCGGAAATCGTTTTTCTTTATATTTTGATATCAACCAGTCTTGGAATACGGGAGCCTGTGGCCAAACAGTAGCTATGGCCGGCGGGGCCGAACAGCCGCCGTACGCGGTGGCCGAGAAATCGTCGACCACCACCATCATGGGCGGTTTCGCGTCGCCGGCATATGCGTTTTACGCCACGGAACGCTGCATGGGGTTTCAGCAGTACGAACGCCGAGTTGGTAATCCCTCTGCGACCTCTTCTCAATTGTCAAACCCTAACGACCAGGAATTCCCTCTTTATCAATCCGACCCCGGCTTCGAATTGTCCAACACCTTGCAAGCAATGGTGGAATCTCAATTGACTGGGAATCAGTACCGTACATCTGGATCCCCTGAAAAATCCAGCAAGTTTCTTCCTGTTCAACAACACGATGCTGCTTTGGTTAAGAGCACCTCATCATCGAATCTCTATAATGGAAATCAGGACCATACAGTTGCTCTTGGCTCGTACAATTTTGATGCTGCTCAGTTGGGATTCTCTTCTTCTCAGCAAGAGAAGCTGTCTCCAACAACTGTTTCTGGGAACTCTTGTTCTAATGGGACAGCGGTGTCGAGTAAGACTCGAATAAGATGGACTCAGGATCTTCATGAGAAGTTTGTTGAGTGTGTGAATCGCCTTGGAGGTGCTGAGAAGGCAACGCCAAAAGCTATACTAAAGCTGATGGACTCAGATGGATTGACCATCTTCCATGTCAAGAGTCATTTGCAGAAATACAGAATTGCAAAATACATGCCAGACTCGGCTCAAGGGAAGTCCGACAAAAGGACCCATGTAGAAGATGTGCATCATCTTGATGCCAAAACTGGACTGCAAATTAGAGAGGCACTTCAGCTGCAGCTAGATGTTCAAAGGCGTCTGCATGAACAGCTAGAGATTCAGAGGAAATTACAGTTGAGAATTGAGGAACAGGGGAGGCAGCTGAAGATGATGTTTGATCAGCAGCAGAAGACAAGCAATTAG 1068 0.4728 MNENKIDFQPARGLTGDSTNSEFGNRFSLYFDINQSWNTGACGQTVAMAGGAEQPPYAVAEKSSTTTIMGGFASPAYAFYATERCMGFQQYERRVGNPSATSSQLSNPNDQEFPLYQSDPGFELSNTLQAMVESQLTGNQYRTSGSPEKSSKFLPVQQHDAALVKSTSSSNLYNGNQDHTVALGSYNFDAAQLGFSSSQQEKLSPTTVSGNSCSNGTAVSSKTRIRWTQDLHEKFVECVNRLGGAEKATPKAILKLMDSDGLTIFHVKSHLQKYRIAKYMPDSAQGKSDKRTHVEDVHHLDAKTGLQIREALQLQLDVQRRLHEQLEIQRKLQLRIEEQGRQLKMMFDQQQKTSN 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g2292 355 FunFam Myb family transcription factor 221 279 - -
Bisa03g2292 355 Pfam MYB-CC type transfactor, LHEQLE motif 306 353 IPR025756 -
Bisa03g2292 355 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 221 279 IPR017930 -
Bisa03g2292 355 Gene3D - 221 280 - -
Bisa03g2292 355 Pfam Myb-like DNA-binding domain 226 275 IPR001005 -
Bisa03g2292 355 NCBIfam myb-like DNA-binding domain, SHAQKYF class 222 277 IPR006447 GO:0003677
Bisa03g2292 355 Coils Coil 309 329 - -
Bisa03g2292 355 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 219 353 IPR044848 GO:0003700
Bisa03g2292 355 SUPERFAMILY Homeodomain-like 220 276 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g2292 Bisa-ChrBisa03 33453558 33455577 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g2292 202 350 G2-like Transcription Factor Family AT4G28610 56.291 7.30e-53 178
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Bisa03g2292 Myb_DNA-binding 1e-06 CL0123