Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g2268 ATGGGGGAACAGTCCTCCGATGCGATGAACCTTGATTTGAATCTGGGTCCGAGTCCAGACCCAGCGGCTGGTTCCATAACCAATGAAGCTTTGAACTTGGACGATTGGATTGAGGAGCCTTTTCATAGAGTTAGAGAAGTAGTAAGACATGGGGCTCGACAAAGGTGGAGATGGCGGCATCTTCGAATTAACCCACCTGAACCCCATCGGAGTTTTCTGATTTCGCCTGAAGCCCATGCGGATATTCTCATTTCACCTGAAGCCCAAAATGTTTCAATGGAATTGAATCATTTGTTGGTCAACCCTAGTAATGGAAATGCATTACAAGCTGGTGAAGGTAGTGTGGCAGCTGAAGATAGAGCAGAGGAGTCACCAAAGGCCTGTGAAAATAACAATGGAATTACAGAGGATGAGGCATCGGATAAGAAGGATGATGTTGAAAAGGGTAGTGGTAGTGATGGGAGCTTCTTTGATTGTAATATATGTTTGGACCTGGCTAGGGATCCTGTTGTGACTTGTTGTGGTCATTTGTTTTGTTGGCCATGCCTCTATCGCTGGCTGCATGTTCATTCAGACGCTAAGGAATGTCCAATCTGCAAGGGAGAGGTAACATTTAAAAATGTCACCCCAATATATGGTCGGGGGAACAATGTCCGTGAACCTGATGAAGATCCTAGTCTTAAAGTACCTCTTAGACCTCATGCTAGGCGTGTTGAAAGTCTGAGACAAACTCTTCATAGAAATGCATTTGCATTCCCAGTGGAGGAGATGATTCGGCGTCTTGGAAGTAGAATTGATCTCTCTCGAGATATAGTTCAACCACATGAACCTGACAATGGACGTGAAATAGCAAGTACTACCTTGCTAAATAGGATTTTGACATCTCGAGCATTACGGAGAGAGCATAATCATGGGGCAGCCCCAGATGATGATGTGGATTTAACTCAAAACAACATCGGTAGCCCTGAGGCAGGGCATAACCGCAGGATTCAATCCCTTTTACGTCAAAGAGCATTACGGAGAGGGCATTATCAAGGGGCAGCCTCAGATGATGTTGTGGATTTAACTCAAAACAACATTGGTAGCCCTGAGGCAGGGGATAACCGCAGGGTTCAATCCCTTTTACTTCGAAGAACACAATCACATAGAACAACACTTTCTTCTCTTTCAACAGCTCTGAGTTCTGCTGAAAGATTTGTTGAGGCATATATCCGTAGCAATTCTATAGGTAGAAACCAAGAACAACCTCCACCAGTCGATGATAGAGATTCCTTTTCAAGTGTTGCTGCTGTAGACACTGCTGTAGAGATTGATTCCATGGTGTCCTTGTCAACATCCTCTTCCAGAAGGAGAAACGATACTTCTCGAGTTTCTGATGTGGATAGTGGAGATTCTCGAGCTCCCAGGCGAAGACGTTTGAACTGA 1425 0.4484 MGEQSSDAMNLDLNLGPSPDPAAGSITNEALNLDDWIEEPFHRVREVVRHGARQRWRWRHLRINPPEPHRSFLISPEAHADILISPEAQNVSMELNHLLVNPSNGNALQAGEGSVAAEDRAEESPKACENNNGITEDEASDKKDDVEKGSGSDGSFFDCNICLDLARDPVVTCCGHLFCWPCLYRWLHVHSDAKECPICKGEVTFKNVTPIYGRGNNVREPDEDPSLKVPLRPHARRVESLRQTLHRNAFAFPVEEMIRRLGSRIDLSRDIVQPHEPDNGREIASTTLLNRILTSRALRREHNHGAAPDDDVDLTQNNIGSPEAGHNRRIQSLLRQRALRRGHYQGAASDDVVDLTQNNIGSPEAGDNRRVQSLLLRRTQSHRTTLSSLSTALSSAERFVEAYIRSNSIGRNQEQPPPVDDRDSFSSVAAVDTAVEIDSMVSLSTSSSRRRNDTSRVSDVDSGDSRAPRRRRLN 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g2268 474 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 109 217 IPR013083 -
Bisa03g2268 474 MobiDBLite consensus disorder prediction 440 474 - -
Bisa03g2268 474 MobiDBLite consensus disorder prediction 407 426 - -
Bisa03g2268 474 MobiDBLite consensus disorder prediction 1 22 - -
Bisa03g2268 474 MobiDBLite consensus disorder prediction 452 474 - -
Bisa03g2268 474 MobiDBLite consensus disorder prediction 109 147 - -
Bisa03g2268 474 ProSitePatterns Zinc finger RING-type signature. 174 183 IPR017907 -
Bisa03g2268 474 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF5-RELATED 123 297 IPR045103 GO:0005783|GO:0006511|GO:0061630
Bisa03g2268 474 Pfam Zinc finger, C3HC4 type (RING finger) 159 199 - -
Bisa03g2268 474 SMART ring_2 159 199 IPR001841 -
Bisa03g2268 474 CDD RING-HC_AtRMA-like 157 200 - -
Bisa03g2268 474 SUPERFAMILY RING/U-box 155 212 - -
Bisa03g2268 474 FunFam E3 ubiquitin-protein ligase RMA3 127 248 - -
Bisa03g2268 474 ProSiteProfiles Zinc finger RING-type profile. 159 200 IPR001841 -
Bisa03g2268 474 MobiDBLite consensus disorder prediction 303 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g2268 Bisa-ChrBisa03 33000344 33001768 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g2268 1 465 C3H Transcription Factor Family AT3G58030 46.817 1.91e-122 362