Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g2242 ATGAACGTCCAGTCTTTCTCTCAGCTTCCCTTCATCCGCCCTCCCCCTCTCAAAGAAAAGCCCATCAAGCTCTTCGGCATTGAATTCCCCAATTCCTCCGACGTCGACGACCCCAACACCACCGACCACGACGACAAGGACTCGGCAGCCGCCGCCGCCGACACCGGCGAGACCAACCGCCGCTTCGAATGCCACTACTGCTGCCGCAACTTCCCGACCTCCCAAGCCTTAGGCGGGCACCAGAACGCCCACAAGCGGGAGCGGCAGCACGCGAAGCGAGCCCAGCAGCACTCCGTGATGTTCTACAACACCCTCTCCCTCGACTCCTCACAAAATCTCTACAGCCTCATGAACTACCACCGCCTCGGCTCGGCTCATCCCGCGCCGCCCATCACCTATCCCACGTGGCACAACACTGTTACTACCTCATCATCATCATCATCGACTGCTAATGCTATTACGACTACTACCACTGCTAGCGGAAGGTTTTACGGGGGTTCCAATTCATATCCTCATCATCAGCTTCAACCCATCAACGGAAGCCCCTTGGCCTCATGGCCAATCCCCACCTTCCAAAGCAACCCCGCTTCTCTCAGCCGTGACCGTTCGATGATGCAGCATCATCATCCCTTGCCTTTATTTGCCGCCGACGAAATTAACGTCAGGGCTTCGCAGGTTGTCGCCTCTGCTTCGCAGAATCGGTTCGTTTATGACTCTAAACCCTCGGTCCAAGATCATGTGAGTTTGGATCTTCATCTGTAA 762 0.5604 MNVQSFSQLPFIRPPPLKEKPIKLFGIEFPNSSDVDDPNTTDHDDKDSAAAAADTGETNRRFECHYCCRNFPTSQALGGHQNAHKRERQHAKRAQQHSVMFYNTLSLDSSQNLYSLMNYHRLGSAHPAPPITYPTWHNTVTTSSSSSSTANAITTTTTASGRFYGGSNSYPHHQLQPINGSPLASWPIPTFQSNPASLSRDRSMMQHHHPLPLFAADEINVRASQVVASASQNRFVYDSKPSVQDHVSLDLHL 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g2242 253 Pfam C2H2-type zinc finger 61 86 - -
Bisa03g2242 253 PANTHER ZINC FINGER PROTEIN GIS 1 253 IPR044291 GO:0003700|GO:0009739|GO:0010026|GO:0010090
Bisa03g2242 253 MobiDBLite consensus disorder prediction 28 55 - -
Bisa03g2242 253 MobiDBLite consensus disorder prediction 37 51 - -
Bisa03g2242 253 Gene3D Classic Zinc Finger 40 113 - -
Bisa03g2242 253 ProSitePatterns Zinc finger C2H2 type domain signature. 64 84 IPR013087 -
Bisa03g2242 253 ProSiteProfiles Zinc finger C2H2 type domain profile. 62 89 IPR013087 -
Bisa03g2242 253 SUPERFAMILY beta-beta-alpha zinc fingers 59 90 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g2242 Bisa-ChrBisa03 32554317 32555078 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g2242 1 253 C2H2 Transcription Factor Family AT3G58070 39.362 6.44e-41 139
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa03g2242 03 32554317 32555078 Bisa07g3178 07 66526149 66526817 CCT
Bisa03g2242 03 32554317 32555078 Bisa03g2242 03 32554317 32555078 ECH