Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g2237 ATGGGAATTCCCAAGTCTGCGAGGCAACAGAACAGGCATGATGATGGAAAGGACCGCCACATTGCAAATTCTCTGAAAATGCCGGCTGGTCATGGTTTGAGAGCTCGCACCAGAGACTCGTTCTCTAGGCCCTTCAGGAAGAAGGGTACCATAGCACTAACGACCTACCTTAGAACTTACAAAACAGGCGACTACGTAGACATCAAGGTCAATGGCGCCGTCCACAAGGGTATGCCTCACAAATTCTACCATGGACGCACCGGTCGCGTCTGGAACGTAACCAAGCGTGCCATTGGTGTCGAGGTGAACAAGCAGGTTGGGAACAGGATAATCAGTAAGAGAATCCACGTGCGTGTGGAGCATGTGATGCCCTCAAGGTGCACTGAAGAGTTCCGTCTCAGAAAAATCAAGAATGATCAACTCAAGGCTGAGGCAAAGGCAAAGGGAGATGTCATCAGCACAAAGAGGCAGCCCGAGGGACCTAAACCAGGTTTCATGGTTGAAGGTGCTACGTTGGAGACTGTAACTCCCATTCCATACGACGTTGTCAATGACCTCAAAGGTGGTTACTAG 573 0.5026 MGIPKSARQQNRHDDGKDRHIANSLKMPAGHGLRARTRDSFSRPFRKKGTIALTTYLRTYKTGDYVDIKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEVNKQVGNRIISKRIHVRVEHVMPSRCTEEFRLRKIKNDQLKAEAKAKGDVISTKRQPEGPKPGFMVEGATLETVTPIPYDVVNDLKGGY 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g2237 190 SUPERFAMILY Translation proteins SH3-like domain 29 125 IPR008991 -
Bisa03g2237 190 FunFam 60S ribosomal protein L21 27 124 - -
Bisa03g2237 190 Pfam Ribosomal protein L21e 27 127 IPR001147 GO:0003735|GO:0005840|GO:0006412
Bisa03g2237 190 PANTHER 60S RIBOSOMAL PROTEIN L21 27 189 IPR001147 GO:0003735|GO:0005840|GO:0006412
Bisa03g2237 190 MobiDBLite consensus disorder prediction 1 22 - -
Bisa03g2237 190 ProSitePatterns Ribosomal protein L21e signature. 63 88 IPR018259 GO:0003735|GO:0005840|GO:0006412
Bisa03g2237 190 Gene3D Ribosomal protein L21 27 123 IPR036948 GO:0003735|GO:0005840|GO:0006412
Bisa03g2237 190 MobiDBLite consensus disorder prediction 8 22 - -
Bisa03g2237 190 FunFam 60S ribosomal protein L21 125 184 - -
Bisa03g2237 190 Gene3D - 125 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g2237 Bisa-ChrBisa03 32422034 32424779 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g2237 27 190 Cytoplasmic Ribosomal Protein Gene Family AT1G09690 84.146 1.35e-104 296