Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g2232 ATGAGAACTTCATGGGCGGATTCTGTTGACAATTTAACCATTGGTTCTTCTGATACCAATGTCGCTCGCCCTTCCCGTGCTGCATATGTTCCTCCACATCTTCGTAATAAGCCACCGTCTTCAGAGCCCCCTGTAACATCACAGCAATTTTCTTTACCAGCTAATGATCGGATAAATTATGGGGGGTCGACTGCTGGTTCTCGTGGGGGCAGCTCCTTTAATAGGCCAGATCATTGGAAGCAGGATTATGGTTATAGTGGTCGAATTGGCGGGGGTTGGAACAATAAAGGCGGAGATTGGGACCGAGGAAGGGAACATGAGGTCAACCCATTTGAGGACGATGAAGCTACAGATCATGCTTTTGAGCAAGAAAACACAGGCATTAACTTTGAAGCTTATGATGATATCCCTGTGGACACTAGTGGGGAGAATGTGCCTCCGCCTGTAAATACTTTTGCGGAAATAGACTTGGGCGACGCTTTGAATCAAAACATACGGAGGTGCAAGTATGTCAAACCAACTCCAGTTCAGAGGTATGCCATACCAATTTCTCTTGCAGGGCGAGATCTGATGGCTTGCGCTCAGACAGGTTCTGGCAAGACAGCTGCTTTTTGCTTTCCCATTATAAGTGGAATCCTGAGAAAGCCACATATTCAAAGACCGCGTGTAGGACGAACTGCTTTCCCTCTGGCTCTTATCCTGTCTCCTACCCGGGAACTTTCATGTCAGATACATGATGAGGCTAAAAAGTTCTCCTATCAAACTGGTGTCAAGGTGGTAGTTGCTTATGGAGGAGCGCCAATTAACCAGCAGTTGCGGGAGCTTGAGAGAGGAGTTGATATTCTTGTGGCAACTCCAGGACGACTGGTAGATTTGCTAGAGAGGGCTAGGGTGTCACTGCAAATGATAGGATATTTAGCTCTTGATGAAGCAGATCGGATGTTGGATATGGGTTTTGAGCCTCAAATAAGAAAGATAGTTGAACAAATGGACATGCCTCTTCAAGGCATAAGACAAACAATGCTATTTAGTGCCACTTTTCCCAAAGAGATACAGAGACTTGCATCAGATTTCCTTTCAAATTATGTGTTTCTGGCTGTTGGAAGGGTTGGTTCAAGTACTGATCTAATTGCTCAAAGGGTAGAATATGTCCTTGAGTCCGACAAGAGAAGCCACCTCATGGACCTTCTTCATGCTCAGAAAGAAAATGGAATTTATGGCAAGCAAGGTCTGACATTAGTTTTTGTGGAAACGAAGAAAGGAGCTGATGCGTTGGAACACTGGTTGTGTATCAACGGGTTTCCTGCAACCAGCATTCATGGTGACAGAACGCAGCAGGAAAGAGAACTAGCATTGAGGTCGTTCAAGAGCGGAAACACACCAATTTTAGTGGCAACAGATGTTGCAGCACGTGGTCTTGATATTCCCCGTGTAGCTCATGTGGTTAATTTTGATCTTCCCAATGACATTGATGACTATGTGCACCGTATAGGAAGAACAGGGAGAGCCGGCAAGATGGGATTAGCGACTGCCTTCTTTAATGATAATAATTTGTCGTTGGCTAAGCCATTGGCTGATCTGATGCAAGAGGCAAATCAAGAAGTACCTGCCTGGCTTACTCGTTATGCTGCAAGAGCTTCCTACGGTGGTGGCAATAGAAACAGGCGTTCCGGGGCCCGTTTTGGCGGGCGGGATTATAGAAGGGACAACCAACATAATAAAGCACAAGATTACTATGGTGGAATGAGTGGATACGGGGTTCCTGGTGGTTATGGTGTTGGTGGTGGGTATGGTCCTCCTGGGGGAGTTACAAGTGCCTGGGATTAG 1827 0.4614 MRTSWADSVDNLTIGSSDTNVARPSRAAYVPPHLRNKPPSSEPPVTSQQFSLPANDRINYGGSTAGSRGGSSFNRPDHWKQDYGYSGRIGGGWNNKGGDWDRGREHEVNPFEDDEATDHAFEQENTGINFEAYDDIPVDTSGENVPPPVNTFAEIDLGDALNQNIRRCKYVKPTPVQRYAIPISLAGRDLMACAQTGSGKTAAFCFPIISGILRKPHIQRPRVGRTAFPLALILSPTRELSCQIHDEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIGYLALDEADRMLDMGFEPQIRKIVEQMDMPLQGIRQTMLFSATFPKEIQRLASDFLSNYVFLAVGRVGSSTDLIAQRVEYVLESDKRSHLMDLLHAQKENGIYGKQGLTLVFVETKKGADALEHWLCINGFPATSIHGDRTQQERELALRSFKSGNTPILVATDVAARGLDIPRVAHVVNFDLPNDIDDYVHRIGRTGRAGKMGLATAFFNDNNLSLAKPLADLMQEANQEVPAWLTRYAARASYGGGNRNRRSGARFGGRDYRRDNQHNKAQDYYGGMSGYGVPGGYGVGGGYGPPGGVTSAWD 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g2232 608 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 181 365 IPR014001 -
Bisa03g2232 608 Pfam DEAD/DEAH box helicase 174 354 IPR011545 GO:0003676|GO:0005524
Bisa03g2232 608 Gene3D - 368 548 IPR027417 -
Bisa03g2232 608 SMART helicmild6 423 504 IPR001650 -
Bisa03g2232 608 FunFam Probable ATP-dependent RNA helicase DDX4 113 367 - -
Bisa03g2232 608 Pfam Helicase conserved C-terminal domain 389 504 IPR001650 -
Bisa03g2232 608 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 230 519 IPR027417 -
Bisa03g2232 608 SMART ultradead3 169 380 IPR014001 -
Bisa03g2232 608 FunFam ATP-dependent RNA helicase RhlB 368 547 - -
Bisa03g2232 608 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 392 543 IPR001650 -
Bisa03g2232 608 MobiDBLite consensus disorder prediction 1 50 - -
Bisa03g2232 608 Gene3D - 106 367 IPR027417 -
Bisa03g2232 608 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 150 178 IPR014014 GO:0003724
Bisa03g2232 608 MobiDBLite consensus disorder prediction 1 23 - -
Bisa03g2232 608 CDD SF2_C_DEAD 377 513 - -
Bisa03g2232 608 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 119 543 - -
Bisa03g2232 608 CDD DEADc_DDX3_DDX4 151 371 IPR044763 GO:0003724|GO:0005524
Bisa03g2232 608 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 77 338 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g2232 Bisa-ChrBisa03 32348096 32353255 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g2232 148 536 Eukaryotic Initiation Factors Gene Family AT3G19760 30.612 5.77e-59 201