Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g2199 ATGGGCAACAACTGCGTAGGGCCACAACTTGGCGGGAATGGCTTCTTGCAATCTGTTTCCGCCGCTTTTGTGCGAAAAAACCCTCTCGATAACATAATTCCTTCGCCGGATTGCGACGCCGACGACACCAAAAACGACACCGACGCCGGTAAAAATCCGGCCAATGTAGACCCCGGTTCCTCTAAAGATTCGAGTGCTCCTGAAGATTCTAATCCCCCGGGCCCAAATAACAGTGTACCACCTGAAACGATGAAGATTCCCAACGGCGAATCGAAACCGCCGGAGCATGAGAAGGCCGCGAAGCCGGAGGTTAATGATCCGCCGTCGGATACAGGTGATACTGCGAACGCTAAGAAAACCACTCACCATAGAAGGGTGTCTAGTGTTGGACTTCAAGTAGAATCGGTGTTGGGAAGGAAAACTAGGAATTTGAAGGATGTCTACAGTGTGGGGCGGAAGGTAGGACAAGGGCAGTTTGGGACGACGTTCTTCTGTTTAGAGAAGACAACTGGAAAAGAGTTTGCCTGTAAAACAATTGTCAAGAGAAAATTGTCAACTCTGGAGGATGTGGAAGATGTTAGAAGGGAGATTCAGATTATGCACCATTTGGCAGGCAATCCCAATGTGATACAGATCGTTGGTGCCTATGAGGACGCCGTTGCTGTCAATGTTGTTATGGAATTTTGTTGTGGTGGGGAGCTGTTTGACAGGATCATACAGAGAGGACACTACACTGAGCAAAGGGCAGCTCAGCTTGCAAGGGTAATAGTCCATGTTGTGGAAGCGTGCCATTCCTTGGGTGTCATGCACCGGGACTTGAAGCCAGAGAACTTCCTGTTCGTCAACCAGGAAGAAGACTCACTTCTTAAGGCAATAGATTTTGGGCTCTCTGTGTTCTTTAAACCAGGTCAAATATTTACTGATGTGGTTGGGAGCCCATACTATGTGGCCCCCGAAGTTCTGCAGAAGTACTATAGTCAGGAATGTGATATTTGGAGTGCTGGGGTGATGATTTATATTTTACTATGTGGAGTTCCCCCATTTTGGGATGAGACGGAGCAAGGAATTTTTGATCAAATTTTGAAAGGAGAACTTGACTTCATATCTGAACCATGGCCTAGCATATCTGAAGGTGCAAAGGATCTAGTCCGTAAAATGCTGGTAAGGGACCCTAAGAAGAGGTTGACAGCACATGAAGTTCTTTGCCACCCTTGGGTTCAGGTTGATGGTGTTGCTCCAGATAAACCTCTTGATTCTGTCTTGACTCGTTTGAAGCAATTCTCTGCGATGAACAAACTCAAAAGGATGGCCATCCGAGTAATTGCCGAAAGTCTGTCTGAGGAGGAAATAGGAGGGCTGAAAGAAATGTTCAAGATGATAGACACAGATAACAGTGGACAAATTACTTTAGAGGAACTAAAAAATGGATTGGAGAGAGTGGGTGCCGATCTCAAGGAATCTGAAATTATTTGGTTAATGCAGGCGGCAGATATTGATAATAGTGGTACCATAGACTATGGTGAGTTCATAGCGGCCATGCTTCATGTAAACAAGATTCAGAGGGAGGATCATCTATTTGCAGCTTTCAACTACTTTGACAAAGATGGGAGTGGGTATATTACCCGAGATGAGCTCCAACACGCCTGTGACCAATTTGGTCTGCAAGATGTTCAACTAGACGACATAATACGTGAAGTTGACCGGGATAATGATGGACGAATTGATTACAGTGAGTTTGTTGCAATGATGGAAGACGTTGGTATTGGCAGAAAGGGTCAAAATTCCATGAGTAAAGTTACGGATGCTTTCAAGAATCAGTGA 1821 0.4552 MGNNCVGPQLGGNGFLQSVSAAFVRKNPLDNIIPSPDCDADDTKNDTDAGKNPANVDPGSSKDSSAPEDSNPPGPNNSVPPETMKIPNGESKPPEHEKAAKPEVNDPPSDTGDTANAKKTTHHRRVSSVGLQVESVLGRKTRNLKDVYSVGRKVGQGQFGTTFFCLEKTTGKEFACKTIVKRKLSTLEDVEDVRREIQIMHHLAGNPNVIQIVGAYEDAVAVNVVMEFCCGGELFDRIIQRGHYTEQRAAQLARVIVHVVEACHSLGVMHRDLKPENFLFVNQEEDSLLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLQKYYSQECDIWSAGVMIYILLCGVPPFWDETEQGIFDQILKGELDFISEPWPSISEGAKDLVRKMLVRDPKKRLTAHEVLCHPWVQVDGVAPDKPLDSVLTRLKQFSAMNKLKRMAIRVIAESLSEEEIGGLKEMFKMIDTDNSGQITLEELKNGLERVGADLKESEIIWLMQAADIDNSGTIDYGEFIAAMLHVNKIQREDHLFAAFNYFDKDGSGYITRDELQHACDQFGLQDVQLDDIIREVDRDNDGRIDYSEFVAMMEDVGIGRKGQNSMSKVTDAFKNQ 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g2199 606 FunFam Calcium-dependent protein kinase 1 150 233 - -
Bisa03g2199 606 SUPERFAMILY EF-hand 445 584 IPR011992 -
Bisa03g2199 606 PANTHER SERINE/THREONINE-PROTEIN KINASE 140 579 - -
Bisa03g2199 606 ProSitePatterns EF-hand calcium-binding domain. 497 509 IPR018247 -
Bisa03g2199 606 ProSiteProfiles EF-hand calcium-binding domain profile. 448 483 IPR002048 GO:0005509
Bisa03g2199 606 Gene3D Transferase(Phosphotransferase) domain 1 234 429 - -
Bisa03g2199 606 Gene3D - 430 587 - -
Bisa03g2199 606 CDD EFh 453 513 IPR002048 GO:0005509
Bisa03g2199 606 CDD EFh 524 583 IPR002048 GO:0005509
Bisa03g2199 606 MobiDBLite consensus disorder prediction 29 130 - -
Bisa03g2199 606 SUPERFAMILY Protein kinase-like (PK-like) 148 407 IPR011009 -
Bisa03g2199 606 ProSitePatterns EF-hand calcium-binding domain. 567 579 IPR018247 -
Bisa03g2199 606 FunFam Calcium-dependent protein kinase SK5 234 418 - -
Bisa03g2199 606 Pfam EF-hand domain pair 523 584 IPR002048 GO:0005509
Bisa03g2199 606 Pfam EF-hand domain pair 453 513 IPR002048 GO:0005509
Bisa03g2199 606 ProSitePatterns Serine/Threonine protein kinases active-site signature. 268 280 IPR008271 GO:0004672|GO:0006468
Bisa03g2199 606 Pfam Protein kinase domain 148 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa03g2199 606 ProSitePatterns EF-hand calcium-binding domain. 461 473 IPR018247 -
Bisa03g2199 606 Gene3D Phosphorylase Kinase; domain 1 150 233 - -
Bisa03g2199 606 SMART efh_1 452 480 IPR002048 GO:0005509
Bisa03g2199 606 SMART efh_1 558 586 IPR002048 GO:0005509
Bisa03g2199 606 SMART efh_1 524 552 IPR002048 GO:0005509
Bisa03g2199 606 SMART efh_1 488 516 IPR002048 GO:0005509
Bisa03g2199 606 ProSiteProfiles Protein kinase domain profile. 148 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa03g2199 606 ProSitePatterns Protein kinases ATP-binding region signature. 154 181 IPR017441 GO:0005524
Bisa03g2199 606 FunFam Calcium-dependent protein kinase 1 414 587 - -
Bisa03g2199 606 ProSiteProfiles EF-hand calcium-binding domain profile. 554 589 IPR002048 GO:0005509
Bisa03g2199 606 ProSiteProfiles EF-hand calcium-binding domain profile. 520 553 IPR002048 GO:0005509
Bisa03g2199 606 CDD STKc_CAMK 147 405 - -
Bisa03g2199 606 SMART serkin_6 148 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa03g2199 606 MobiDBLite consensus disorder prediction 57 72 - -
Bisa03g2199 606 ProSiteProfiles EF-hand calcium-binding domain profile. 484 519 IPR002048 GO:0005509
Bisa03g2199 606 MobiDBLite consensus disorder prediction 89 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g2199 Bisa-ChrBisa03 31840048 31845344 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g2199 1 592 EF-hand Containing Proteins AT2G38910 71.838 0.0 868
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Bisa03g2199 Pkinase 5.9e-72 CL0016