Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g2198 ATGTACACATCTTTTTGCACGCAAAATTCCAAAAACCCTAGCAAGCTTCCTTCTCGCCCGGGCCTCTCCTCTTCTTCTTCTTGGGAACTTCCTTTTTGGCCAGAAACGTGTGTGTGTGACGGGGAGATCAGAATGGAGAAAACAAATTCGTCAGGGATGTTAGCGAGAACAAAATCGGATCAGCTGGTGGAGACGGTGGTGGCGGCGCTGAAGTCAGCGCCGTCGAGCGAGTCAATCAACGGAATGGTGGACAGCGGGGGCAGCGGCGGGGGAGCGACGCCGTCGAGGAAGTCAAGTCGGAGGATGATGGCGGCATCGCCGGCGCGGAGCAGCGGGGGGAAGAACACGCACATTCGGAAGAGCCGAAGCGCTCAGATAAAGCTGGAGTTGGACGAAGTGGGAAGCGGCGCGGCGCTTAGCCGAGCCTCCAGCGCCAGCTTGGGCCTCTCGTTCTCCTTTACCGGCTTCACTCTCCCGCCAGAGGAAGCCGCCGACTCTAAGCCATTCAGCGACGATGATATTCCGGAGGATCTTGAAGCTGGAGCTTGCAAGCCAAGGTTTCAAACAGAACCCACTTTGCCGATTTATCTAAAGTTCAAGGATGTGAGCTACAAGGTGGTGATGAAAGGCATGACAACAAGTGAAAAGAAGGATATCTTAAACGGGATTACTGGTTCTGTGAATCCTGGAGAAGTTTTGGCTTTGATGGGACCCTCAGGAAGTGGAAAGACTACTCTCTTGAATCTGCTAGGAGGCAGGTTGATACAGTCCACAGTTGGAGGCTCCATTACTTACAATGACCAGCCATATAACAAGTTCCTGAAGAGCAGAATAGGATTTGTGACTCAAGATGATGTTCTGTTTCCTCACCTCACAGTGAAAGAAACACTTACATACGCAGCCCGTCTGCGACTCCCAAAGACATTCACAAAGGACCAGAAGGAAAAACGAGCTTTGGATGTCATCTGTGAGCTTGGGTTAGAGAGGTGTCAAGACACGATGATTGGTGGCTCCTTTGTTCGGGGGGTATCTGGTGGAGAGAGGAAGAGAGTTTCCATTGGGAATGAAATTATAATCAATCCTTCTCTTCTGTTTCTGGATGAACCAACTTCTGGTTTGGATTCCACAACAGCCTTGAAGATTGTTCAGATGCTACAGGACATAGCAGAGGCCGGTAAAACAGTAGTGACAACAATTCACCAACCATCAAGCAGACTGTTTCACAAGTTTAATAAGTTGATCCTTCTGGGAAAAGGGAGCTTGCTTTACTTTGGGAAAGCATCGGAAACAATGTCCTACTTCCAGTCTATAGGATGTTCACCTCTTATTGCCATGAACCCAGCTGAATTTTTGCTAGACCTTGCCAATGGAAACATAAATGATGTTTCTGTACCGTCGGAGTTAGAGGATAAAGTGCAGATGGGAAATTTAGAAACAGAAACAAAGAACGGAAAACCATCACCAGCAGTTGTACACGAGTACCTTGTAGAGGCATATGAGAGTCGAGTTGCTGAAACGGAGAAGAGAAAGCTAATGGTTCCTGTATCACTTGATGAATCACTCAAGTCTAAGGTTTGTTCTCCTAAAAGACAGTGGGGGGCTAGCTGGTGTGAGCAATATTCCATACTGTTCTGCAGAGGAATAAAAGAAAGAAGGCACGAGTACTTCAGCTGGTTAAGAATCACACAAGTTCTCTCCACTGCAGTCATCTTGGGGTTACTTTGGTGGCAATCAGATGCTGATAATCCAAGAGGCCTTCAAGATCAGGCAGGATTGCTTTTCTTCATAGCGGTGTTCTGGGGATTCTTTCCTGTTTTCACAGCAATATTTACGTTTCCACAAGAGAAAGCCATGCTGGCGAAGGAGCGAGCAGCTGACATGTACAGACTAAGTGCATACTTTGTGGCTAGGACAACAAGTGACCTTCCATTGGATTTAATATTACCAGTACTGTTCCTGCTTGTTGTTTATTTCATGGCCGGTTTAAAGCTAAGTGCCGACTCCTTCTTCTATAGCATCCTCACTGTCTTCCTCTGCATTGTGGCAGCTCAGGGACTTGGACTCGCAATTGGGGCCACACTAATGGACTTGAAGAAAGCAACAACTCTGGCTTCCGTAACTGTGATGACCTTCATGCTGTCTGGAGGATTTTTCGTGAAGGAAGTGCCGGTGTTCATATCGTGGATTCGGTGCATGTCGTTTAACTACCACACTTATAAGCTGTTGCTGAAGGTGCAATACGGAGGCGTGACGCAGAGAATAAATGGGATGAGAATTGACAGTGGTTGGACGGAGGTGGGTGCTCTGATCGCCATGGTTTTTGGGTATCGTTTCTTGGCGTATCTTTCTCTGAGGATGATGAGGCTTAATTGCGGAGCTTGA 2382 0.4769 MYTSFCTQNSKNPSKLPSRPGLSSSSSWELPFWPETCVCDGEIRMEKTNSSGMLARTKSDQLVETVVAALKSAPSSESINGMVDSGGSGGGATPSRKSSRRMMAASPARSSGGKNTHIRKSRSAQIKLELDEVGSGAALSRASSASLGLSFSFTGFTLPPEEAADSKPFSDDDIPEDLEAGACKPRFQTEPTLPIYLKFKDVSYKVVMKGMTTSEKKDILNGITGSVNPGEVLALMGPSGSGKTTLLNLLGGRLIQSTVGGSITYNDQPYNKFLKSRIGFVTQDDVLFPHLTVKETLTYAARLRLPKTFTKDQKEKRALDVICELGLERCQDTMIGGSFVRGVSGGERKRVSIGNEIIINPSLLFLDEPTSGLDSTTALKIVQMLQDIAEAGKTVVTTIHQPSSRLFHKFNKLILLGKGSLLYFGKASETMSYFQSIGCSPLIAMNPAEFLLDLANGNINDVSVPSELEDKVQMGNLETETKNGKPSPAVVHEYLVEAYESRVAETEKRKLMVPVSLDESLKSKVCSPKRQWGASWCEQYSILFCRGIKERRHEYFSWLRITQVLSTAVILGLLWWQSDADNPRGLQDQAGLLFFIAVFWGFFPVFTAIFTFPQEKAMLAKERAADMYRLSAYFVARTTSDLPLDLILPVLFLLVVYFMAGLKLSADSFFYSILTVFLCIVAAQGLGLAIGATLMDLKKATTLASVTVMTFMLSGGFFVKEVPVFISWIRCMSFNYHTYKLLLKVQYGGVTQRINGMRIDSGWTEVGALIAMVFGYRFLAYLSLRMMRLNCGA 793
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g2198 793 Gene3D - 196 437 IPR027417 -
Bisa03g2198 793 SMART AAA_5 229 420 IPR003593 GO:0016887
Bisa03g2198 793 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 150 781 - -
Bisa03g2198 793 MobiDBLite consensus disorder prediction 74 123 - -
Bisa03g2198 793 MobiDBLite consensus disorder prediction 1 29 - -
Bisa03g2198 793 Pfam ABC transporter 220 371 IPR003439 GO:0005524
Bisa03g2198 793 CDD ABCG_EPDR 194 425 - -
Bisa03g2198 793 Pfam ABC-2 type transporter 400 500 IPR043926 GO:0140359
Bisa03g2198 793 FunFam ABC transporter G family member 22 207 437 - -
Bisa03g2198 793 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 197 443 IPR003439 GO:0005524
Bisa03g2198 793 ProSitePatterns ABC transporters family signature. 343 357 IPR017871 GO:0005524|GO:0016887
Bisa03g2198 793 Pfam ABC-2 type transporter 539 747 IPR013525 GO:0016020|GO:0140359
Bisa03g2198 793 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 197 435 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g2198 Bisa-ChrBisa03 31804130 31812153 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g2198 219 457 Calmodulin-binding Proteins AT2G36910 29.032 6.16e-15 77.4