Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g2193 ATGGAGGTTCTAGATATGGAGACGAAGAATAACGAACACCTGACATCGGCTGCCGCCTTTGTGGAGGGGGGAATTCAAGAAGCATGTGGTGACTCTTGCAGCATATGCCTTGAGGATTTTAGCGAAAGTAATCCTTCAACGGTTACTACTTGCAAGCATGACTTTCACCTGCAGTGCATTCTAGAATGGTGCCAGAGGAGCTCCCAGTGCCCTATGTGTTGGCAATCTATTAATTTCAGGGATGCTGCCAGTCAAGAATTGCTTGATGCTGTGGAGCAGGAAAGGAGCTTGAGGGCTACTATGTCAAGAAATGCTGCTATCTTCCACCATCCTGCACTTGGTTATTTTAACTTGGAGCATCTTTCCATCGGAGTAAATGATGGAGAAGAGCGGATATTTCAACATTTAGCTGCTGCCACAGCAATGGGAAGAGCACACCACCTTGGTCGGAGGGAAGGACATAGAACTAGACCATCATCTCATGGTCGCCAACAATTCCTAGTGTTCTCAACTCCCCCACCCGGTGCTGTTCCACCTGCTGGAGGGGGGACTGAACCAGCTGCAACTTCTGTAGGAAATCCGTCTAGCCCACTTACATATGAAGGAGATGAACAATCACAGCAGATCCCAAGCCTTCAAACTCAGAATTCTTCTCCAGCTCCTGGATGTAATGCCATGGCATCGACTCGTGAAGGAGTTTTGTCTAATGATCGAGGCTCTGCTGATCGTTCTGTGCCATCAAACCAAGGTAAAGCAGGACCATCAGAACTTCAGTCATTTTCCGAGTCTCTCCGGTCCAGACTTGGTTCAGCATCCATGAGATACAAAGAGACAATTTCAAAGGGTGCTAGGGGATGGAAGGAAAAGCTGTTCTCTCGTAGTACTTCCATGTCCGACATTGGTTCAGAAGTTAAGAGAGAGCTGAATGCAGGAATTGCTAGTGTATCCCGATTGATGGAGCGCCTTGACACCAGAGAAAATAACAGTAGAGCTGCCGGGGGTAGCTTGTCGCATCATTTGCCCGCTGAGACAAGCAACCCGAACAATGCTGTGGCACAAGGAGAAAACACTCTGCGCGACAACAATACCCCAGCTACTTGTTCCGCTAGCCCACATTCAAACTGA 1125 0.4827 MEVLDMETKNNEHLTSAAAFVEGGIQEACGDSCSICLEDFSESNPSTVTTCKHDFHLQCILEWCQRSSQCPMCWQSINFRDAASQELLDAVEQERSLRATMSRNAAIFHHPALGYFNLEHLSIGVNDGEERIFQHLAAATAMGRAHHLGRREGHRTRPSSHGRQQFLVFSTPPPGAVPPAGGGTEPAATSVGNPSSPLTYEGDEQSQQIPSLQTQNSSPAPGCNAMASTREGVLSNDRGSADRSVPSNQGKAGPSELQSFSESLRSRLGSASMRYKETISKGARGWKEKLFSRSTSMSDIGSEVKRELNAGIASVSRLMERLDTRENNSRAAGGSLSHHLPAETSNPNNAVAQGENTLRDNNTPATCSASPHSN 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g2193 374 SMART ring_2 33 73 IPR001841 -
Bisa03g2193 374 MobiDBLite consensus disorder prediction 144 260 - -
Bisa03g2193 374 ProSiteProfiles Zinc finger RING-type profile. 33 73 IPR001841 -
Bisa03g2193 374 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 11 83 IPR013083 -
Bisa03g2193 374 MobiDBLite consensus disorder prediction 328 374 - -
Bisa03g2193 374 Pfam Ring finger domain 31 73 IPR001841 -
Bisa03g2193 374 MobiDBLite consensus disorder prediction 188 260 - -
Bisa03g2193 374 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE 10 81 - -
Bisa03g2193 374 SUPERFAMILY RING/U-box 26 80 - -
Bisa03g2193 374 MobiDBLite consensus disorder prediction 326 374 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g2193 Bisa-ChrBisa03 31738079 31741192 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g2193 31 81 C3H Transcription Factor Family AT4G00335 49.020 8.14e-14 67.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa03g2193 03 31738079 31741192 Bisa03g2193 03 31738079 31741192 ECH