Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g2190 ATGATAATTGAGACAGAGGTTGCAAAACCAAAGAAACGTCAAAATGTGAAGAAACTAGCATCTGCTGGGCTTCAAGCAGATTCTGTTCTGCAAACAAAAACTGGTCATCTCAAGGAGTTCTACAACTTGGGACGAAAGCTCGGGCACGGGCAATTCGGGAAAACTTTTCTGTGTGTGGAGAAAGCTACAGGTAAAGAGTATGCCTGCAAGTCCATTGCAAAGAGGAAATTGCTGACATATGATGATGTGGAGGATGTGAGGAGGGAGATTCAAATAATGCATCACTTGGCAGGTTGCCCCAATGTGATATCAATCAAAGGGGCCTATGAGGATTCTATTGCAATTCATGTAGTGATGGAACTATGTGAAGGAGGTCCGCTATTTGATAGGATTAAGGAAAGAGGGCGTTATACTGAAAGAGAAGCAGCAAAACTTGCAAGGACTATAGTTAGTGTTATAGAAGCTTGTCACTCACTTGGAGTAATGCATCGTGATCTTAAGCATGAGAATTTTCTCTTTGTTAGTCAGGATGAAGACTCACCCCTTAAGGCCATTGACTTTGGATTGTCTACATTTTTCAAACCAGATGTGGTGGGAACTTCTTATTATATTGCACCTGAAGTTCTGGGGAAGCGATATGGTCCGGAAGCCGATGTGTGGAGTGTTGGTGTGATGATTTACATTCTGTTATGTGGGGTGCCTCCATTTTGGGCTGAAACGGAACAAGGCATATTTATGGAGATTTTGTATGGCGATCTTGATTTCTCATCGGATCCTTGGCCTAAAATCTCTGAAAGTGCTAAGGACTTGGTGAGGAAAATACTGGTTAGAGATCGCAGAAAACGGATAACTGCTCATGAAGTCATCCTTGGATTTAGGGTGATTGCGGAGAATCTATTAGAAGAGGAAATTGCTGGATTGAAAGAAATGTTTAAAATGATAGACACAGACAACAGTAGTCAAATTACTTTTGAAAAACTAAAGAATGGGCTAAAAAGACTCGATGCTAATCTCAATGAATCTAAAATACACAATCTAATGAAAGCAGTAGAGAGGGAAGATCATTTAGCCACAGCTTTCTCATACTTTGATAAAGATGGAAGTGGCTACATTACACCAGATGAGCTTTAA 1131 0.4058 MIIETEVAKPKKRQNVKKLASAGLQADSVLQTKTGHLKEFYNLGRKLGHGQFGKTFLCVEKATGKEYACKSIAKRKLLTYDDVEDVRREIQIMHHLAGCPNVISIKGAYEDSIAIHVVMELCEGGPLFDRIKERGRYTEREAAKLARTIVSVIEACHSLGVMHRDLKHENFLFVSQDEDSPLKAIDFGLSTFFKPDVVGTSYYIAPEVLGKRYGPEADVWSVGVMIYILLCGVPPFWAETEQGIFMEILYGDLDFSSDPWPKISESAKDLVRKILVRDRRKRITAHEVILGFRVIAENLLEEEIAGLKEMFKMIDTDNSSQITFEKLKNGLKRLDANLNESKIHNLMKAVEREDHLATAFSYFDKDGSGYITPDEL 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g2190 376 Gene3D Phosphorylase Kinase; domain 1 43 127 - -
Bisa03g2190 376 Pfam Protein kinase domain 41 288 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa03g2190 376 ProSiteProfiles EF-hand calcium-binding domain profile. 302 337 IPR002048 GO:0005509
Bisa03g2190 376 PANTHER SERINE/THREONINE-PROTEIN KINASE 31 376 - -
Bisa03g2190 376 ProSiteProfiles EF-hand calcium-binding domain profile. 351 376 IPR002048 GO:0005509
Bisa03g2190 376 CDD STKc_CAMK 40 288 - -
Bisa03g2190 376 FunFam Calcium-dependent protein kinase 1 43 126 - -
Bisa03g2190 376 ProSitePatterns Serine/Threonine protein kinases active-site signature. 161 173 IPR008271 GO:0004672|GO:0006468
Bisa03g2190 376 ProSiteProfiles Protein kinase domain profile. 41 300 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa03g2190 376 SUPERFAMILY EF-hand 293 376 IPR011992 -
Bisa03g2190 376 SUPERFAMILY Protein kinase-like (PK-like) 40 289 IPR011009 -
Bisa03g2190 376 CDD EFh 307 376 IPR002048 GO:0005509
Bisa03g2190 376 Gene3D - 300 351 - -
Bisa03g2190 376 ProSitePatterns Protein kinases ATP-binding region signature. 47 74 IPR017441 GO:0005524
Bisa03g2190 376 SMART efh_1 306 334 IPR002048 GO:0005509
Bisa03g2190 376 SMART efh_1 355 376 IPR002048 GO:0005509
Bisa03g2190 376 Gene3D Transferase(Phosphotransferase) domain 1 128 299 - -
Bisa03g2190 376 Pfam EF hand 358 376 IPR002048 GO:0005509
Bisa03g2190 376 ProSitePatterns EF-hand calcium-binding domain. 364 376 IPR018247 -
Bisa03g2190 376 Gene3D - 352 376 - -
Bisa03g2190 376 FunFam Calcium-dependent protein kinase 5 127 302 - -
Bisa03g2190 376 SMART serkin_6 41 295 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g2190 Bisa-ChrBisa03 31665040 31666927 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g2190 8 376 EF-hand Containing Proteins AT3G10660 64.815 0.0 563
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Bisa03g2190 Pkinase 6.9e-67 CL0016