Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g2189 ATGAATGAGAAGATTCCAACGGCGGCCAGCGGACGGCTGCCGGCGGCTTGGCGTACCACTGAGCCCTCCACGAATGACCAACAGAGCAATTTGGTAGGAATCAATTTCATCTTTGCCACTGAATTTCAATTTTTAACTGAAAGAAAAAAAAAACCTCTGCCGTCCAATAAGACTGGAGCATCTTGGAGAACCGTCCGATTAACTGAGCTTTCGCACGCGTTTTCTACCCAATTTGAAACATTCCTTGGAACAGTTAAACCGGTAAGAATTTCGAAGGATGCACTATTTCCCAGTGTTCCCGCTTCACTTTGGTGGTCACGACCAATAAGGGATGTAATTTCTCATCCCAGTAAGCCATCGTCCACACATGAAGGGCCCAACGATTCAGAGACTGTTCAAAACAACCCACCAGAGGTAGTGAAAATCTATAAGAGAGAAACAAAACCAGAGCAGGTGGTGCAGCCACGTCAGCCCAAAATCCAGGACAAAGAGACCAAATCCTCAGAGCCAATGAAGGAATCAAGAATACCTCAATCAGTGACAGTTAAGACAGAGATAGTTATACCAGTAGAGCTTGCAAAACCGAAGAAGCCTCAAAATGTGAAGAAACTAGCATCTGCTGGGCTTCAAGCAGATTCTGTTCTGCAAACAAAAACTGGTCATCTCAAGGAGTTCTACAACTTGGGACGAAAGCTCGGGCACGGGCAATTCGGGAAAACTTTTATGTGTGTCGAGAAAGCTACAGGTAAAGAGTATGCCTGCAAATCCATTGCAAAGAGGAAATTGCTGACATATGATGATGTGGAGGATGTGAGGAGGGAGATTCAGATAATGCATCACTTGGCAGGTTGCCCCAATGTGATATCAATCAAAGGGGCTTATGAGGATTCTATTGCAGTTCATGTAGTGATGGAACTATGTGAAGGAGGTGAGCTGTTTGATAGGATTCTGGAAAGAGGGCATTACACTGAAAGAAAAGCAGCAAAGCTTGCAAGGACCATCGTTAGTGTCATAGAAGCTTGTCACTCCCTTGGAGTAATGCATCGTGATCTTAAGCCTGAGAATTTTCTCTTTGTTAGTCAGGATGAAGACTCACACCTTAAGGCCATTGACTTTGGATTGTCTACATTTTTCAAACCAGGACAAACTTTCACAGATGTGGTGGGAAGTCCTTATTATGTTGCACCTGAAGTTCTGGGGAAGCGATATGGTCCGGAAGCCGATGTGTGGAGTGCTGGTGTGATGATTTACATTCTGTTATGTGGGGTGCCTCCATTTTGGGCTGAAACGGAGCAAGACATATTTATGGAGGTTTTGCGGGGCGATCTCGATTTCTCATCGGATCCTTGGCCTAAAATCTCTGAAAGTGCTAAGGACTTGGTGAGGAAAATGCTGGTTAGAGATCCAAGAAAACGGATAACTGCACATGAAGTTCTTTGTCATCCTTGGATTCAGGGTGAAGGAGAAGCTCCAGACAAGCCTCTTGATTCCGCTGTTCTGAGTCGCCTGAAGCAGTTTTCTGCCATGAACAAGCTCAAGAAAATGGCTATTAGAGTGATTGCGGAGAATCTGTCAGACGAGGAAATTGCTGGATTGAAAGAAATGTTTAAGATGATAGACACTGACAACAGTGGTCAAATTACTTTCGAAGAACTAAAAAATGGGCTAAAGAAATTCGGTGCTAATCTCAATGAATCTGAAATACATGACCTGATGCAAGCAGCAGATGTTGATAACAGTGGGACAATAGACTATAAAGAGTTCATAGCTGCAACATTACATTTGAATAAAGTAGAGAGGGAAGATCATTTAGCTGCAGCTTTCTCATACTTTGATAAAGATGGAAGTGGCTACATTACACCAGATGAGCTTCAACAAGCTTGCCAAGAACTCGGCATGGAAGAATTTCGGTTGGAAGATATAATCCAAGAAGCAGATCAGGACAATGATGGGCAAATAGATTACAAAGAATTTGTGGCTATGATGCAGAGAGGGAACACGGAGTTGGGTAAGAAGGGTCAAAAGGGAAGTAGTAATTATACGATTGGATATAGAGAGGCACTATCAGTATGTTAA 2076 0.433 MNEKIPTAASGRLPAAWRTTEPSTNDQQSNLVGINFIFATEFQFLTERKKKPLPSNKTGASWRTVRLTELSHAFSTQFETFLGTVKPVRISKDALFPSVPASLWWSRPIRDVISHPSKPSSTHEGPNDSETVQNNPPEVVKIYKRETKPEQVVQPRQPKIQDKETKSSEPMKESRIPQSVTVKTEIVIPVELAKPKKPQNVKKLASAGLQADSVLQTKTGHLKEFYNLGRKLGHGQFGKTFMCVEKATGKEYACKSIAKRKLLTYDDVEDVRREIQIMHHLAGCPNVISIKGAYEDSIAVHVVMELCEGGELFDRILERGHYTERKAAKLARTIVSVIEACHSLGVMHRDLKPENFLFVSQDEDSHLKAIDFGLSTFFKPGQTFTDVVGSPYYVAPEVLGKRYGPEADVWSAGVMIYILLCGVPPFWAETEQDIFMEVLRGDLDFSSDPWPKISESAKDLVRKMLVRDPRKRITAHEVLCHPWIQGEGEAPDKPLDSAVLSRLKQFSAMNKLKKMAIRVIAENLSDEEIAGLKEMFKMIDTDNSGQITFEELKNGLKKFGANLNESEIHDLMQAADVDNSGTIDYKEFIAATLHLNKVEREDHLAAAFSYFDKDGSGYITPDELQQACQELGMEEFRLEDIIQEADQDNDGQIDYKEFVAMMQRGNTELGKKGQKGSSNYTIGYREALSVC 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g2189 691 Pfam EF-hand domain pair 602 663 IPR002048 GO:0005509
Bisa03g2189 691 SMART efh_1 637 665 IPR002048 GO:0005509
Bisa03g2189 691 SMART efh_1 567 595 IPR002048 GO:0005509
Bisa03g2189 691 SMART efh_1 603 631 IPR002048 GO:0005509
Bisa03g2189 691 SMART efh_1 531 559 IPR002048 GO:0005509
Bisa03g2189 691 SUPERFAMILY EF-hand 523 664 IPR011992 -
Bisa03g2189 691 MobiDBLite consensus disorder prediction 141 171 - -
Bisa03g2189 691 ProSitePatterns EF-hand calcium-binding domain. 612 624 IPR018247 -
Bisa03g2189 691 FunFam Calcium-dependent protein kinase SK5 312 496 - -
Bisa03g2189 691 Gene3D - 496 667 - -
Bisa03g2189 691 MobiDBLite consensus disorder prediction 115 176 - -
Bisa03g2189 691 Pfam Protein kinase domain 226 484 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa03g2189 691 ProSiteProfiles EF-hand calcium-binding domain profile. 563 598 IPR002048 GO:0005509
Bisa03g2189 691 ProSiteProfiles EF-hand calcium-binding domain profile. 637 668 IPR002048 GO:0005509
Bisa03g2189 691 CDD EFh 603 663 IPR002048 GO:0005509
Bisa03g2189 691 ProSitePatterns Protein kinases ATP-binding region signature. 232 259 IPR017441 GO:0005524
Bisa03g2189 691 CDD STKc_CAMK 225 483 - -
Bisa03g2189 691 MobiDBLite consensus disorder prediction 115 136 - -
Bisa03g2189 691 Gene3D Transferase(Phosphotransferase) domain 1 312 495 - -
Bisa03g2189 691 Pfam EF-hand domain pair 544 594 IPR002048 GO:0005509
Bisa03g2189 691 SMART serkin_6 226 484 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa03g2189 691 ProSiteProfiles EF-hand calcium-binding domain profile. 527 562 IPR002048 GO:0005509
Bisa03g2189 691 ProSiteProfiles Protein kinase domain profile. 226 484 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa03g2189 691 PANTHER SERINE/THREONINE-PROTEIN KINASE 215 658 - -
Bisa03g2189 691 ProSitePatterns EF-hand calcium-binding domain. 540 552 IPR018247 -
Bisa03g2189 691 FunFam Calcium-dependent protein kinase 1 228 311 - -
Bisa03g2189 691 FunFam Calcium-dependent protein kinase 1 492 666 - -
Bisa03g2189 691 ProSitePatterns EF-hand calcium-binding domain. 646 658 IPR018247 -
Bisa03g2189 691 CDD EFh 532 591 IPR002048 GO:0005509
Bisa03g2189 691 ProSiteProfiles EF-hand calcium-binding domain profile. 599 634 IPR002048 GO:0005509
Bisa03g2189 691 SUPERFAMILY Protein kinase-like (PK-like) 217 507 IPR011009 -
Bisa03g2189 691 Gene3D Phosphorylase Kinase; domain 1 228 311 - -
Bisa03g2189 691 ProSitePatterns Serine/Threonine protein kinases active-site signature. 346 358 IPR008271 GO:0004672|GO:0006468
Bisa03g2189 691 ProSitePatterns EF-hand calcium-binding domain. 576 588 IPR018247 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g2189 Bisa-ChrBisa03 31652538 31657133 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g2189 90 666 EF-hand Containing Proteins AT3G10660 66.292 0.0 830
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Bisa03g2189 Pkinase 3e-74 CL0016