Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g2182 ATGACCCATTTCTCAGAGAAGATCCGCCTCTCTTCCCTGGTCGTCAAACCGACCCGATTTCTCTCGCAGAAGCTCACTCTCCTCTCCCTCTCCACCTTCCATCTCTGCAAGTCCCTTGCTCGCTTCCTACTCTCCAAAACCCTCTCCCTCCTCACCATGGACAATTTCTTTGCCGATCACGACGACTACTTTTGGGACCTCGATTCTCGTTCCCAGCGTCGCTTCTTTCGAGAACAAGAGCCCAACTTGGCGAATGAGCCCCTCTACTTGGTTCTTTACCGGTGGTGGACAGAAGTAGAAGGGGATGCTGATCGGGTGGGAAGTGTCCTTTACACAGTATCAACGAACACTGGTTCTGAGTCTGAAATTGTCCTTCATTTGAGGAAGGAAGACAACCACGAGGAAATTATAAACACTGAGGTGGGATCTTCAGGGCGTCAATATGCATTGGTTCCTGAAGGATTGTGGTTGCGTGCTCTCAAACGGTTCACTGATTCTAATAATGCAGTGAAGGACTTTGGAGACCTCTTCTATGCAGAAGATTGTTTTCTGGATTTGTTCCCCTTGCAAGTTAGGATATTTGGTTTATGGGAAACAAATTCACTGGTAGCAAAAATAAGTCGAATGGAAAATTTGGGTGACAACTACAGGAAAGCTTGCAATATTTTCAGTTCTGACTATAATCCAGTTCACATTTTGGACTTCTCAGGGCAGACAACCCAATTTTTTGAAAATAATAACGAGTCTCCCGGGCAACAAGGAAAAGGGGTTCTTCTAGAGCTGCAAGTTCATGGACTTTCCGATTCTATAAAGAGTAATGGAGGCAATGATATATTTGCAGAGAGGTCTCCAATGGGATGTTCCTCTCACGGTCGCTCTGTTATGATGAATGGAACTACTCACAATGTGAATTCCTATGTAACAACTGCCAACTCCTTTCAAAGGAGTAGCTATAGAGCAATTGGCTCTTTGGGCTTGACAGGGTTACAGAATCTTGGAAATACTTGCTTTATGAATAGCGCCATTCAGTGTTTGGTTCACACCCCAAAGCTTGTTGACTTTTTCCTGGGAGATTATCGGAAAGAAATAAATTATGAAAATCCTTTGGGAATGAATGGAGAACTTGCTTTAGCTTTTGGGGATCTACTTAGAAAGCTATGGGTTCCTGGAGCAAGGCCTGTGGCACCAAGAATGTTCAAGATGAAACTTGCTAATTTTGCTCCTCAGTTTAGTGGTTATAACCAACATGATTCTCAAGAACTTCTTGCTTTTTTGTTGGATGGACTCCATGAAGACCTTAATCGCGTGAAGCGCAAGCCATATCATGAAGTTAAAGATGTAGATGGTCGTCCAGATGAAGAAGTGGAAGAAGAGTATTGGCGTAATCACCTTGCTCGCAATGACTCCATAATAGTTGATTTGTGCCAAGGTCAGTTCCGATCAACATTGGTTTGCCCTGTTTGCAAGAAGGTTTCTATTACTTTTGACCCTTTTATTTATCTGTCTTTGCCACTACCTTCTACAATGATGCGGACAATTACTTTGACTGTCCTGAGCACTGATGGGATTACCCTGCCTTTAACATTCACCATAACATTACCCAAGAGTGGATTATTAATGGATCTTGTTCAGGACTTAGGTACTGCATGCTCCTTAAGAGAAGATGAAACTCTCTTGGTGGCTGAGATATACAAGAATCGCATCTGTCGTCTGTTAGAGGAGCCATCTGATTCGTTAGCCTTGATTAGAGGTGAGGACAAACTTGTTGCTTACCGATTACCAAAAGATAATGAGACCAGCCCCTTGGTTGTTTTCATGCATCATCAGATGACAAAGCAATACAGTTTTGGGAGGGAGAAGTATGTAGAAAGTTTGTTTGGCATTCCTATTGTGGCAAGGTTGCCCAATGTTTCTTGTGGATATGATATTCGTAGGGAGTTTCTTAAGTTAATCAATCCATTTCTAATGTCCGCAGAAGATGTATTAGACGAGTATGATAATGATGATGTTGTGGATAATAAAGTTAGTAAAGATAATGAGTTGGATGATGCCACTAGCTCTGGGGGTTTGGAAAGTGATTCAGATTCAGATTTGGAGGCTGACTTCAAATTCTACTTAACAAAAGGAATAGAGAATGTGAAGATAAAAATGAACAAACCATTGCCATTCACAGTGCTACCCAAAAATCTGGAGGTGGCTGTGTTATGGTCAGATAAGATGATTCAAAAGTATGATACATGTCTGCTCAGCTCATTGCCTGAGGTTTTCAAGCCGCAGTTATTCGCCAAAAGAACACCAGAATCAATTTCTGTTTACAAGTGCCTTGAAGCCTTCTTAAAAGAGGAGCCTCTTGGGCCAGAAGACATGTGGTACTGTCCTAGCTGCAAAAAACCTCAGCAAGCGACCAAAAAACTAGATCTTTGGAGATTGCCTGAAATTCTTGTTGTTCATTTGAAGAGATTTTCATTCAGCCGATTCTTCAAGAACAAGCTGGAAACATTCGTTGATTTACCAATCAATGATTTTGACCTATCAACATATATTGCCCACAAAAATAGCCACTCTTCCAACCATTACGAGTTGTATGCAATTAGTTGTCATTATGGAGGCTTGGGAGGAGGTCATTATACAGCATTTGTTCGTTATGGTCGTGACAAATGGTACGAGTTCGATGATAGCAGGGTTGTCCCTACCAGTGAGGACATGATAAAGACTTCCGCTGCATATGTTCTTTTCTACAGGAGAGTTTAG 2751 0.4202 MTHFSEKIRLSSLVVKPTRFLSQKLTLLSLSTFHLCKSLARFLLSKTLSLLTMDNFFADHDDYFWDLDSRSQRRFFREQEPNLANEPLYLVLYRWWTEVEGDADRVGSVLYTVSTNTGSESEIVLHLRKEDNHEEIINTEVGSSGRQYALVPEGLWLRALKRFTDSNNAVKDFGDLFYAEDCFLDLFPLQVRIFGLWETNSLVAKISRMENLGDNYRKACNIFSSDYNPVHILDFSGQTTQFFENNNESPGQQGKGVLLELQVHGLSDSIKSNGGNDIFAERSPMGCSSHGRSVMMNGTTHNVNSYVTTANSFQRSSYRAIGSLGLTGLQNLGNTCFMNSAIQCLVHTPKLVDFFLGDYRKEINYENPLGMNGELALAFGDLLRKLWVPGARPVAPRMFKMKLANFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKRKPYHEVKDVDGRPDEEVEEEYWRNHLARNDSIIVDLCQGQFRSTLVCPVCKKVSITFDPFIYLSLPLPSTMMRTITLTVLSTDGITLPLTFTITLPKSGLLMDLVQDLGTACSLREDETLLVAEIYKNRICRLLEEPSDSLALIRGEDKLVAYRLPKDNETSPLVVFMHHQMTKQYSFGREKYVESLFGIPIVARLPNVSCGYDIRREFLKLINPFLMSAEDVLDEYDNDDVVDNKVSKDNELDDATSSGGLESDSDSDLEADFKFYLTKGIENVKIKMNKPLPFTVLPKNLEVAVLWSDKMIQKYDTCLLSSLPEVFKPQLFAKRTPESISVYKCLEAFLKEEPLGPEDMWYCPSCKKPQQATKKLDLWRLPEILVVHLKRFSFSRFFKNKLETFVDLPINDFDLSTYIAHKNSHSSNHYELYAISCHYGGLGGGHYTAFVRYGRDKWYEFDDSRVVPTSEDMIKTSAAYVLFYRRV 916
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g2182 916 Gene3D Cysteine proteinases 313 524 - -
Bisa03g2182 916 ProSitePatterns Ubiquitin specific protease (USP) domain signature 2. 859 876 IPR018200 GO:0004843|GO:0006511
Bisa03g2182 916 SUPERFAMILY Cysteine proteinases 325 916 IPR038765 -
Bisa03g2182 916 MobiDBLite consensus disorder prediction 673 695 - -
Bisa03g2182 916 Pfam Ubiquitin carboxyl-terminal hydrolase 327 913 IPR001394 GO:0004843|GO:0016579
Bisa03g2182 916 CDD Peptidase_C19R 744 914 - -
Bisa03g2182 916 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 327 916 IPR028889 -
Bisa03g2182 916 ProSitePatterns Ubiquitin specific protease (USP) domain signature 1. 328 343 IPR018200 GO:0004843|GO:0006511
Bisa03g2182 916 Gene3D Cysteine proteinases 607 916 - -
Bisa03g2182 916 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 250 915 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g2182 Bisa-ChrBisa03 31471964 31480051 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g2182 767 916 Miscellaneous Gene Families AT2G24640 33.333 3.01e-17 84.0