Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bisa03g2177 | ATGAACAACACAATTGGCTCCTCTGAGTTCTTCGGGTCCGGAAACATAAGTGGGTTCGGTTACGGCATAGGGGTTTCAATTGGAATTCTGCTTCTCATTGCCACCATCACCCTCGCCTCCTACTTCTGCACCCGCACGCAGCACCCCACTGCTCCGCCGGCCCGCAGAGACATCAACGGCCTCGAACCGCCGCACAGGGTGGTCGACGTGGTGGGCATAGACGAGGCCACAATCGTGAGCTACCCGAAGCTGCTTTACTCCGAAGCCAAGCCCAAGCTCCAGAAATCGGACTCCGCTGCCACGTGTTGCTCCATATGCCTGGCCGATTACAAGGGCAGTGATGTGCTTCGGGTTCTACCTGATTGCGGCCACCTCTTCCACGTCAGCTGTGTAGACCCGTGGCTCCGGATGCATCCCACGTGTCCTCTCTGCAGAACCTCTCCGATCCCCACCCCGCTTTGTACGCCTCTGGCTGAAGTGGCTCCGTTGGCCACCACCAGGCATATCTCATAG | 513 | 0.5848 | MNNTIGSSEFFGSGNISGFGYGIGVSIGILLLIATITLASYFCTRTQHPTAPPARRDINGLEPPHRVVDVVGIDEATIVSYPKLLYSEAKPKLQKSDSAATCCSICLADYKGSDVLRVLPDCGHLFHVSCVDPWLRMHPTCPLCRTSPIPTPLCTPLAEVAPLATTRHIS | 170 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bisa03g2177 | 170 | Pfam | Ring finger domain | 103 | 145 | IPR001841 | - | |
Bisa03g2177 | 170 | PANTHER | TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED | 1 | 159 | IPR045899 | - | |
Bisa03g2177 | 170 | CDD | RING-H2_PA-TM-RING | 102 | 145 | - | - | |
Bisa03g2177 | 170 | SUPERFAMILY | RING/U-box | 102 | 150 | - | - | |
Bisa03g2177 | 170 | SMART | ring_2 | 103 | 144 | IPR001841 | - | |
Bisa03g2177 | 170 | ProSiteProfiles | Zinc finger RING-type profile. | 103 | 145 | IPR001841 | - | |
Bisa03g2177 | 170 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 65 | 149 | IPR013083 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Bisa03g2177 | Bisa-ChrBisa03 | 31367025 | 31367537 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Bisa03g2177 | 12 | 164 | C3H Transcription Factor Family | AT5G06490 | 50.857 | 6.05e-56 | 173 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Bisa03g2177 | 03 | 31367025 | 31367537 | Bisa07g2447 | 07 | 54878611 | 54879135 | CCT |