Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g2177 ATGAACAACACAATTGGCTCCTCTGAGTTCTTCGGGTCCGGAAACATAAGTGGGTTCGGTTACGGCATAGGGGTTTCAATTGGAATTCTGCTTCTCATTGCCACCATCACCCTCGCCTCCTACTTCTGCACCCGCACGCAGCACCCCACTGCTCCGCCGGCCCGCAGAGACATCAACGGCCTCGAACCGCCGCACAGGGTGGTCGACGTGGTGGGCATAGACGAGGCCACAATCGTGAGCTACCCGAAGCTGCTTTACTCCGAAGCCAAGCCCAAGCTCCAGAAATCGGACTCCGCTGCCACGTGTTGCTCCATATGCCTGGCCGATTACAAGGGCAGTGATGTGCTTCGGGTTCTACCTGATTGCGGCCACCTCTTCCACGTCAGCTGTGTAGACCCGTGGCTCCGGATGCATCCCACGTGTCCTCTCTGCAGAACCTCTCCGATCCCCACCCCGCTTTGTACGCCTCTGGCTGAAGTGGCTCCGTTGGCCACCACCAGGCATATCTCATAG 513 0.5848 MNNTIGSSEFFGSGNISGFGYGIGVSIGILLLIATITLASYFCTRTQHPTAPPARRDINGLEPPHRVVDVVGIDEATIVSYPKLLYSEAKPKLQKSDSAATCCSICLADYKGSDVLRVLPDCGHLFHVSCVDPWLRMHPTCPLCRTSPIPTPLCTPLAEVAPLATTRHIS 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g2177 170 Pfam Ring finger domain 103 145 IPR001841 -
Bisa03g2177 170 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 1 159 IPR045899 -
Bisa03g2177 170 CDD RING-H2_PA-TM-RING 102 145 - -
Bisa03g2177 170 SUPERFAMILY RING/U-box 102 150 - -
Bisa03g2177 170 SMART ring_2 103 144 IPR001841 -
Bisa03g2177 170 ProSiteProfiles Zinc finger RING-type profile. 103 145 IPR001841 -
Bisa03g2177 170 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 65 149 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g2177 Bisa-ChrBisa03 31367025 31367537 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g2177 12 164 C3H Transcription Factor Family AT5G06490 50.857 6.05e-56 173
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa03g2177 03 31367025 31367537 Bisa07g2447 07 54878611 54879135 CCT