Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g2171 ATGGCCATGCAATCTGCGTTGTTCAAAGAAGCTGAAGGGACCGTTGGGCAGATGTCTTCTGTCACTTCAGCCCCGTGGTGGAGTGGCTTGGGGTCTCAATCAATTTTTGGGGATTCATGTGGCCAAATGAAACCTTTTTCATTAGAGCTTCCCAACTATGTAGACCAACTTGCTGCCACTAAGCAAGCAGGAAGAGGGGCTGAACAAGTGTTTGACAAAGGAAATACCACTCAGTTCACTATCTTCTCAGATGATTGCAAAATGTCAGGGGATTTACAAAAGCCTCAGGCAGGCATATCACTTCAGTCATTACTTCCTGATCCCCGGACTCGTGTTGAGCTAGGATTCAATCAGCCTATGATCTGCGCAAAATATCCTTATATGGATCAATTTTACGGGCTCTTATCAACCTATGGACCTCAAATTCCGGGCCGTATAATGCTGCCACTTAACATGACATCCGATGATGGACCGATCTATGTTAATGCTAAGCAGTACCATGGAATCATCAGACGTCGGCAATCCCGTGCAAAAGCTGTACTAGAGAATAAATTGACCAAACGTCGCAAGCCCTATATGCATGAATCAAGGCATCTCCATGCAATGCGACGACCAAGAGGGTGCGGTGGTCGTTTCCTGAACTCAAGAAACTCGAACAATGAAATAGCAAAATGTGGGAGTGAAGTGAATAAAACTGGTAATGGACAATTGCGGTCGAGTGGTTCTCAGAATTCAGAAGTGCTGCAATCATCAAAAGAAACAAGTAGAAGCAGTCCGCCCATGTCAGGTTCAGAGGTAACTAGTATGTATTCACAGAGAGGTCTTGATCATGGCTTTACTGTTAACCATCTTGGATCAGCTGTTCATCATTCTCTCGCAGACCTGATAGATAGGCATAGTGCGCATGGCATTGTCATGCCCACCAAATGGGTTGCAGCAGCAGGTAACTGCTGCAGCCTTAAAGTTTGA 969 0.4541 MAMQSALFKEAEGTVGQMSSVTSAPWWSGLGSQSIFGDSCGQMKPFSLELPNYVDQLAATKQAGRGAEQVFDKGNTTQFTIFSDDCKMSGDLQKPQAGISLQSLLPDPRTRVELGFNQPMICAKYPYMDQFYGLLSTYGPQIPGRIMLPLNMTSDDGPIYVNAKQYHGIIRRRQSRAKAVLENKLTKRRKPYMHESRHLHAMRRPRGCGGRFLNSRNSNNEIAKCGSEVNKTGNGQLRSSGSQNSEVLQSSKETSRSSPPMSGSEVTSMYSQRGLDHGFTVNHLGSAVHHSLADLIDRHSAHGIVMPTKWVAAAGNCCSLKV 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g2171 322 PRINTS CCAAT-binding transcription factor subunit B signature 158 180 IPR001289 GO:0003700|GO:0006355
Bisa03g2171 322 PRINTS CCAAT-binding transcription factor subunit B signature 189 212 IPR001289 GO:0003700|GO:0006355
Bisa03g2171 322 MobiDBLite consensus disorder prediction 194 268 - -
Bisa03g2171 322 PANTHER TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED 77 266 IPR001289 GO:0003700|GO:0006355
Bisa03g2171 322 SMART cbf3 154 215 IPR001289 GO:0003700|GO:0006355
Bisa03g2171 322 Pfam CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B 158 212 IPR001289 GO:0003700|GO:0006355
Bisa03g2171 322 Gene3D - 156 216 - -
Bisa03g2171 322 MobiDBLite consensus disorder prediction 212 268 - -
Bisa03g2171 322 ProSiteProfiles NF-YA/HAP2 family profile. 155 215 IPR001289 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g2171 Bisa-ChrBisa03 31256692 31260379 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g2171 23 322 CCAAT-HAP2 Transcription Factor Family AT3G05690 42.769 7.08e-58 188
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YA Bisa03g2171 CBFB_NFYA 5.2e-26 No_clan