Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g2167 ATGAATGACTTGTTCTCTAGCTCCTTCTCTCGCTTCCGCAGCGAGGAATCGTCGCCGGAACACCACCACCATGTGATCGAGATGAGCTCCGCCGGGGCCCCCGCCGGCGGTGTCAACCTCGACAAGTTCTTTGAGGACGTGGAATCGATCAAGGACGAGCTGAAGGAGCTTGAAAGACTGAAGCAGAATCTGCAGAGCTGTCACGAGCAGAGTAAGACACTTCACAATGCCAAGGCCGTCAGGGACCTTCGTACTCGAATGGACAGCAATGTCACTCTTGCTCTGAAGAAGGCCAAGCTCATCAAGGTAAAATTGGAGGCCCTGGAGCGATCCAACGCGGCCAATCGGAGCCTTCCAGGTTGTGGACCCGGGTCGTCGTCCGACAGGACCCGGACCTCCGTGGTCAGCGGGTTGAAGAAGAAGCTGAAGGATTCCATGGACAGTTTCCATGATCTCCGGCACCAGATCTCCTCCGAGTACCGGGAGACCGTACAACGCAGGTATTTCACGGTCACCGGCGAGAATCCCGACGAGAAGACCGTCGACCTCTTGATCTCTACAGGTGAGAGTGAAACCTTCCTTCAGAAAGCCATCCAAGAACAAGGCAGAGGTAGAATTTTGGATACCATCAACGAAATTCAAGAGAGGCACGATGCTGTTAAAGATTTGGAGAAGAATCTGCAGGAGTTGCATCAAGTGTTCCTTGACATGGCAGTGCTGGTGCAATCTCAAGGTGAGCAATTGGATGACATTGAAGGCCACGTGGCAAGAGCTAACTCGTTCGTGAGGAGTGGAGCCCAGCAGTTGCAGACTGCAAGGAAGCACCAGAAAAACACCAGGAAATGGACCTGTTATGCCATTATACTTCTACTTGTGATCATTTTCTTTGTGGTGCTCTTCACTGTGAGACCATGGGAAAATGATGGTGGCAGTCCATCATCGTCACCTCAAACACCTTCACCACCACCACCCCCTCCTCCCGCTCCACCTACAGCCTGA 999 0.5285 MNDLFSSSFSRFRSEESSPEHHHHVIEMSSAGAPAGGVNLDKFFEDVESIKDELKELERLKQNLQSCHEQSKTLHNAKAVRDLRTRMDSNVTLALKKAKLIKVKLEALERSNAANRSLPGCGPGSSSDRTRTSVVSGLKKKLKDSMDSFHDLRHQISSEYRETVQRRYFTVTGENPDEKTVDLLISTGESETFLQKAIQEQGRGRILDTINEIQERHDAVKDLEKNLQELHQVFLDMAVLVQSQGEQLDDIEGHVARANSFVRSGAQQLQTARKHQKNTRKWTCYAIILLLVIIFFVVLFTVRPWENDGGSPSSSPQTPSPPPPPPPAPPTA 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g2167 332 CDD SynN 40 197 IPR006011 GO:0016020
Bisa03g2167 332 Coils Coil 40 77 - -
Bisa03g2167 332 ProSitePatterns Syntaxin / epimorphin family signature. 216 255 IPR006012 GO:0005484|GO:0006886|GO:0016020
Bisa03g2167 332 Gene3D - 207 303 - -
Bisa03g2167 332 FunFam Syntaxin 132 203 303 - -
Bisa03g2167 332 CDD SNARE_syntaxin1-like 209 271 - -
Bisa03g2167 332 MobiDBLite consensus disorder prediction 307 332 - -
Bisa03g2167 332 SMART tSNARE_6 205 272 IPR000727 -
Bisa03g2167 332 PANTHER SYNTAXIN 48 293 IPR045242 -
Bisa03g2167 332 Gene3D - 38 170 - -
Bisa03g2167 332 MobiDBLite consensus disorder prediction 1 23 - -
Bisa03g2167 332 MobiDBLite consensus disorder prediction 315 332 - -
Bisa03g2167 332 Pfam SNARE domain 246 298 IPR000727 -
Bisa03g2167 332 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 210 272 IPR000727 -
Bisa03g2167 332 SMART SynN_4 35 161 IPR006011 GO:0016020
Bisa03g2167 332 Pfam Syntaxin 42 245 IPR006011 GO:0016020
Bisa03g2167 332 FunFam Qa-SNARE, Sso1/Syntaxin1-type, SYP12A-group 37 167 - -
Bisa03g2167 332 Coils Coil 210 233 - -
Bisa03g2167 332 SUPERFAMILY t-snare proteins 38 265 IPR010989 GO:0016020|GO:0016192
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g2167 Bisa-ChrBisa03 31167877 31169381 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g2167 28 325 SNARE and Associated Proteins AT3G11820 72.727 1.53e-157 442