Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g2163 ATGGCTGAGAATCCTGAGATTGAGGTTCCACCATTCTTCGTGTGTCCCATTTCGTTAGAGATCATGAAAGATCCAATCACGGTGTCCACGGGCATCACCTACGACAGAGAGAGCATCGAGAAATGGCTATTCTCGGGGAAGAATAACACTTGCCCCGTCACCAAACAGCCCCTCTCCACTGATCTCACTCCCAACCACACCCTCCGCCGTCTCATGCAAGCTTGGTGCACCGTCAACGCTTCCCACGGCATCCAGAGGATCCCAACCCCTAAGCCTCCCGTCACGCAGTCCCAGCTCTCCAAACTCCTAAACGACGCCGCTCAGTCCCCTCCCTCCCACCTCCAATGCGTCCGCACCCTCAAATCCCTCGCTTCCGAGAACGAAGCCAACAAACGCACCATCCAATCAACCCCCCGCGCCATTGAGTTCCTAGCCTCAATCGTCCTCACCAACACAAACACAAATCCCTCATACGACGTCGTCGAAGACGACGCCTTCCCCTTGAAATCAAACGCAGGCGACGAAGCCTTAAGCCTCCTCCACACCCTCCGCCTGTCCGAATCCGGACTCAACACCCTCCTGTCCTTCCAAAACGGAGATTTTCTTAACTGCCTCACCAGAATCATGCAGAGAGGCATCTACGAGTCACGTGCTTATGCTGTTCTACTGTTGAGGCCGTTACTCGAGATCGCGGATTCCACGGTGCTGTCCAATCTCTCAACAGAATTATTCGTTGAACTGGTTCAAGTGCTGAAAGACCAGATATCGTGGCAGGTGTCGAAGGCGAGCTTGCGAGCGTTGATGCACGCGTGCTCGTGGGGGAGAAACAGAGCGAGGGCGGTGGAGGCAGGGGGAGTGACGGTGCTGATCGAGCTGCTTTTAGAATGTAAAGAGAGGAAGGGGTGCGAGATGATGCTGGTGGGGCTGGAGATACTGTGCGGGTGCGCGGAGGGGAGGTCGGAGCTGCTGGGGCACGCGGCGGGGATGGCGGTGGTGTCGAAGAAGATTCTGAGGGTGTCCACGGTGGCCAACGACAGGGCGGTGAGGATTCTGCTGTTGATTGCAAAGTTCTCTGCGACGCCGGGGGTTCTGCAGGAGATGGTGCTGGTGGGGGTAGTGGCGAAGCTGTGTCTGGTGATTCAGGTTGAGAGTGGGAACAAGGCGAAGGAAAGAGCCAGAGAGATTCTCAGAATGCATGCTCGGGCTTGGAGGAATTCTCCCTGCATACCCAACCATCTGCTTTCTTCTTTCCCAAATTAG 1260 0.5587 MAENPEIEVPPFFVCPISLEIMKDPITVSTGITYDRESIEKWLFSGKNNTCPVTKQPLSTDLTPNHTLRRLMQAWCTVNASHGIQRIPTPKPPVTQSQLSKLLNDAAQSPPSHLQCVRTLKSLASENEANKRTIQSTPRAIEFLASIVLTNTNTNPSYDVVEDDAFPLKSNAGDEALSLLHTLRLSESGLNTLLSFQNGDFLNCLTRIMQRGIYESRAYAVLLLRPLLEIADSTVLSNLSTELFVELVQVLKDQISWQVSKASLRALMHACSWGRNRARAVEAGGVTVLIELLLECKERKGCEMMLVGLEILCGCAEGRSELLGHAAGMAVVSKKILRVSTVANDRAVRILLLIAKFSATPGVLQEMVLVGVVAKLCLVIQVESGNKAKERAREILRMHARAWRNSPCIPNHLLSSFPN 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g2163 419 Gene3D - 96 407 IPR011989 -
Bisa03g2163 419 ProSiteProfiles U-box domain profile. 8 82 IPR003613 GO:0004842|GO:0016567
Bisa03g2163 419 CDD RING-Ubox_PUB 10 61 IPR045210 -
Bisa03g2163 419 FunFam RING-type E3 ubiquitin transferase 3 85 - -
Bisa03g2163 419 Pfam U-box domain 9 78 IPR003613 GO:0004842|GO:0016567
Bisa03g2163 419 SUPERFAMILY RING/U-box 4 83 - -
Bisa03g2163 419 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1 87 IPR013083 -
Bisa03g2163 419 PANTHER WDSAM1 PROTEIN 6 410 IPR045185 GO:0061630
Bisa03g2163 419 SMART Ubox_2 12 75 IPR003613 GO:0004842|GO:0016567
Bisa03g2163 419 SUPERFAMILY ARM repeat 99 355 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g2163 Bisa-ChrBisa03 31067192 31068451 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g2163 4 418 U-box Gene Family AT3G52450 52.535 5.26e-159 454
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa03g2163 03 31067192 31068451 Bisa03g2163 03 31067192 31068451 ECH