Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g2161 ATGGCGACGTACTTCCATGGAAATTCAGAAATTCAAGCGCCCGATGGACTCCAAACTCTAGTTCTCATGAACCCAGGCTACATCCAGTACTCCGACACGCCGCCGCCACAGCCAACGCATCCCGGCAACCTCGTCTTCCTCAATTCTGCCCCCTCTCTCCCTCCCAACCACTCGCTCTCTCCCCAACCCCTCCCCCACGCGCCGCCCTCTCACCCCCAGCAATTCGTCGGCATCCCTCTGCCCGCCTCCCAGGACCCCGCCCACCACGACATCTCCACTTTGCATGGATTTGTCCCTCGCATGCAGTACAACCTTTGGAACTCAGTTGACCACAACGCGGCGGCGCGTGATACCCCACGCGCCAGCCAAGGCCTGTCTTTGAGCCTCTCCTCTCAGCAAGCAGGGATGGGGTCTTTTCGAATCGAGCGTGACGTACCATCGCATGGTCAAGCGAGTGGTATGTCAGGGGATGAGGTGCGCGTGTCAGGTGGGTCGTCATCTTCAGTTTCTGGGGTAACCAATGGCGTCTCGGGGATTCAGAGTGTGCTTCTCGGCTCCAAGTACTTGAAGGCAGCACAGGAACTGCTAGACGAGGTCGTGAATGTGAACGATGGGATTAAAAACGAAATGGCAAAGAAAGGTAGTGGACAGAGCACAAAGGTGATCGGAGAGTCATTCACTGCAGCCGCCAGCACCGGAGATGCCTCCACCGGCGGCGAGGGAAGCGTCAAACCTACCCCCGAGCTTTCAACCGCCGAAAGACAAGAAATTCAGATGAAGAAGGCCAAGTTAATCAGCATGCTTGACGAGGTGGAGCAAAGGTACCGACAGTACCACCATCAGATGCAGATAGTGAGTTCGTCGTTTGAACAAGCTGCGGGAATAGGGTCGGCGAGAACATACACAGCGTTAGCATTACAAACGATCTCGAAGCAGTTTCGGTGTTTGAAAGATGCAATAACGACGCAAATTCGAGCTGCGAATAAAAGCCTAGGAGAGGAAGATTGCTTCGGAGGGAAAATGGAAGGTTCGAGGCTTAAATTTGTGGACCATCATTTACGGCAACAGCGAGCTCTGCAACAGTTGGGAATGATCCAGCACAATGCTTGGAGACCCCAGAGAGGATTGCCCGAGAGATCCGTCTCTGTTCTTCGTGCTTGGCTCTTTGAGCACTTCCTCCACCCCTATCCCAAGGATTCAGACAAACACATGCTTGCAAAACAAACAGGGCTCACCAGGAGTCAGGTGTCGAATTGGTTTATAAACGCTCGGGTTCGGCTATGGAAGCCAATGGTGGAAGAAATGTACATGGAGGAGATGAAGGAGCATGAACAGAATGGGGGGGAAGAGAAATCAAGCAAGAGCAGTGAAGATCCCACGATGAAGTCAACAGCCCCACGAGAGAAAGCCAATGCCACTGAACCCAAAAGCTTCAGTTTCAAACAAGACGTTCCCACAAACCAGAACACTCCAACAGTATCAATATCTACACCATCAACATCATCACCGGTTGGAGCAAATGTGAGAAACCAATCAGGCTTCAGCTTCATGGGGTCATCAGAACTCGACGGGATCACACAGGCAAGTCCCAAGAAACCAAGAAACCTGGAGATTCTGCAGTCCCCAAATATGAAACCAGAAGAAGCAGAGAACAGGGACGGATACTCCTTCATCGGGAATCAGACGAACTTCATAGGGGGATTTGGGCAATACCCAATTGCAGAAATCGATAGGTTTGAGGCAGAGCAATTCACGCCAAGGTTCTCAGGTAATGGGGTTTCTCTCACTCTTGGTCTTCCTCACTGTGACTCCTTATCAGCAGCCACCCACCAGACGTTTCTTCCAAACCAGAGCATTCAGCCGACTGAGTTTGGTGGCATAAGCACTTCCAATCCTCACTCTTCCACTGCGTTTGAGAACATCAACCTGCAAAACCCCAAGAGGTTTGCTGCACAATTGTTGCCAGACTTTGTGGCTTGA 1980 0.5192 MATYFHGNSEIQAPDGLQTLVLMNPGYIQYSDTPPPQPTHPGNLVFLNSAPSLPPNHSLSPQPLPHAPPSHPQQFVGIPLPASQDPAHHDISTLHGFVPRMQYNLWNSVDHNAAARDTPRASQGLSLSLSSQQAGMGSFRIERDVPSHGQASGMSGDEVRVSGGSSSSVSGVTNGVSGIQSVLLGSKYLKAAQELLDEVVNVNDGIKNEMAKKGSGQSTKVIGESFTAAASTGDASTGGEGSVKPTPELSTAERQEIQMKKAKLISMLDEVEQRYRQYHHQMQIVSSSFEQAAGIGSARTYTALALQTISKQFRCLKDAITTQIRAANKSLGEEDCFGGKMEGSRLKFVDHHLRQQRALQQLGMIQHNAWRPQRGLPERSVSVLRAWLFEHFLHPYPKDSDKHMLAKQTGLTRSQVSNWFINARVRLWKPMVEEMYMEEMKEHEQNGGEEKSSKSSEDPTMKSTAPREKANATEPKSFSFKQDVPTNQNTPTVSISTPSTSSPVGANVRNQSGFSFMGSSELDGITQASPKKPRNLEILQSPNMKPEEAENRDGYSFIGNQTNFIGGFGQYPIAEIDRFEAEQFTPRFSGNGVSLTLGLPHCDSLSAATHQTFLPNQSIQPTEFGGISTSNPHSSTAFENINLQNPKRFAAQLLPDFVA 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g2161 659 Coils Coil 254 274 - -
Bisa03g2161 659 MobiDBLite consensus disorder prediction 440 464 - -
Bisa03g2161 659 ProSiteProfiles 'Homeobox' domain profile. 367 430 IPR001356 GO:0003677
Bisa03g2161 659 Pfam Homeobox KN domain 387 426 IPR008422 GO:0003677|GO:0006355
Bisa03g2161 659 SMART prehox3 177 322 IPR006563 -
Bisa03g2161 659 Pfam Associated with HOX 182 321 IPR006563 -
Bisa03g2161 659 MobiDBLite consensus disorder prediction 56 71 - -
Bisa03g2161 659 MobiDBLite consensus disorder prediction 47 71 - -
Bisa03g2161 659 MobiDBLite consensus disorder prediction 146 170 - -
Bisa03g2161 659 SUPERFAMILY Homeodomain-like 371 437 IPR009057 -
Bisa03g2161 659 CDD homeodomain 370 430 IPR001356 GO:0003677
Bisa03g2161 659 MobiDBLite consensus disorder prediction 440 505 - -
Bisa03g2161 659 FunFam BEL1-like homeodomain protein 9 373 435 - -
Bisa03g2161 659 MobiDBLite consensus disorder prediction 475 505 - -
Bisa03g2161 659 MobiDBLite consensus disorder prediction 230 253 - -
Bisa03g2161 659 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 73 456 - -
Bisa03g2161 659 Coils Coil 189 209 - -
Bisa03g2161 659 SMART HOX_1 370 434 IPR001356 GO:0003677
Bisa03g2161 659 Gene3D - 373 452 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g2161 Bisa-ChrBisa03 31000692 31003040 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g2161 1 659 Homeobox Transcription Factor Family AT2G35940 50.000 9.05e-177 517
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Bisa03g2161 POX 6.3e-50 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa03g2161 03 31000692 31003040 Bisa07g2437 07 54679260 54685580 CCT
Bisa03g2161 03 31000692 31003040 Bisa03g2161 03 31000692 31003040 ECH