Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g2155 ATGAAACTGGCTGCAGCCGCCATGGACGAGCGTCTTCTGAAGCTTGTTTCCGTACTCATTCTCTCACTTGCTGTAGTCACTTTTGGTGTCACAGACCCAAATGACGTTAAGATTCTTAACCAATTCAGAAAAGGCCTGGACAATCCGGAGCTTTTGCCGTGGCCTGTAGATGGCGGAGACCCATGTGGGAATCCTCCTTGGAAGTACATCTTCTGCAATGGAAACAGAGTTTCCCAGATTCAGACGAAGAACTTGAACTTGAGTGGTCCCCTGCCTCAGAATTTCAACCAGCTCCACATGCTCGAAAGATTAGGCCTTCAGAACAATAAACTGAACGGGCCTTTACCGTCTTTCAGTGGGTTAGCCAAGTTGCAACAAGCATTCTTGGATTACAATGACTTCGATTCCATTCCGGCTGATTTCTTTGACGGACTTGTGAGTCTGGAAGTTTTGGCATTGGATTATAATAATCTGAATGCCAGTACTGGGTGGCAATTCCCTCCTCAGTTGCAAGATTCGTCGCAATTAACCAATCTTTCCTGTATGAATTGCAATTTGGCTGGTCCATTGCCGAGTTTTCTGGGGAATTTGTCATCTCTGACCGTCTTGAAACTTTCAGGCAACAATTTAACTGGTGAAATTCCGGCAACTTTTAACAGCACAAATTTGCAGGTTCTATGGTTGAACAATCCGCAGGGTGACGGTCTCACAGGTCCTATTGATGTGGTGGCAACCATGACTTCACTCACGAGTCTGTGGCTTCACGGGAATAAGTTCACAGGGACCATTCCTAAGAACATTGGGGATTTAACTTCTCTCAAGGATCTCAATCTCAATGGTAACCAGCTCGTTGGCCTAGTTCCAGATGCTTTGGGTAAAATGAAATTGGACAGTCTGGATTTGAACAATAACCATCTAATGGGTCCAATTCCGAATTTCGCAGCTGCCAAAGTCACTTATGATTCAAATCCTTTTTGTCAATCCAAACCAGGGGTTCCTTGCTCCTTTGAAGTTATGGCACTCCTGGAATTTTTGGATGGTTTGAAGTATCCTTTAGTTCTTGTTAATTCGTGGTCTACTAATGACCCGTGTAATGGGCCATGGTTGGGACTAAAGTGTGATGCCACTGGAAAAGTGTCTATGATTAATTTGCCCAAATTCAATCTCAATGGTACTCTAAGTCCCTCAGTTGCAAATTTGGGTTCTCTTGTTGAGATCAGATTGGGAGGCAACCATTTGAGTGGTCAAATACCCAGTAATTGGACTAGCTTGAATTCTCTGACATTGTTGGATATCACTGACAATAACATTTCCCCTCCTCTGCCACATTTTAGTAGCAAGTTAAAAGTTGTGACTGATGGGAACTCTCTATTAAATGGTAATGCAGAATCCCCTTCATCAGGGAACAGTCCATCATCTGGGAATTCCAAACCTTCACACGATACTCCATCATCCCCATCAACACGCACAAGTCCCAATTCCAACAGCACTTCTAGATCAAAAAATTCCAACAGAAAAATTTTATTTGCAATCGTAGCCCCTGTTGTAGGTGTTGCAGCTGCCGCTTCTCTGCTCATTCCCCTAATATATTGTTACAAGAGGAAAAAGGATAGCTTCCAGGCTCCAACTTCACTAGTAATCCACCCTAGAGATCCATCTGATTCAGACAATACGGTAAAGATTGCTGTTGCTAACAATACCTATGGAAGCATGTCCACTTTAACAAGGAGTGGGTCAGGAAGTAGAAACAGCAGTGGGATTGGGGAGTCTCATGTCATTGAAGCTGGAAATCTTGTGATATCAGTTCAAGTTCTTCGTAATGTGACGAAGAATTTTGCCCCAGAGAATGAGCTTGGCCGTGGCGGATTTGGGGTCGTATACAAGGGAGAATTGGATGATGGGACTAAAATAGCTGTAAAAAGGATGGAAGCTGCTATGATTAGTAATAAAGCTTTGAATGAATTCCAGTCTGAAATTGCTGTTCTATCAAAGGTTAGACACCGTCATCTAGTGTCTCTCCTGGGATACTCCATTGAAGGTAATGAGAGAATTCTAGTTTATGAGTACATGTCACAAGGGGCTCTCAGTCAGCATCTTTTCCATTGGAAGACCTTTAAATTGGAGCCCCTTTCTTGGAAGAGGAGGCTCAATATTGCCTTGGATGTTGCTAGAGGAATGGAGTATCTGCATAGTCTAGCTCACCAGAGCTTCATTCACAGAGATCTTAAGCCTTCTAATATTTTGCTTGGGGATGATTTTAGGGCAAAAGTCTCAGATTTCGGATTAGTAAAACTTGCTCCTGATGGTGAAAAATCTGTAGAAACCCGCCTTGCTGGGACCTTTGGATATTTGGCCCCGGAATATGCAGTGACAGGAAAAATCACAACAAAAGTAGATGTCTTTAGTTTTGGGGTTGTGCTAATGGAGCTGTTGACTGGGTTGATGGCACTTGATGAGGATAGACCTGAGGAAAGCCAATATTTGGTGGCATGGTTCTGGCATATAAAATCTGATGAGGAGAAATTTATGGCTGCTATTGATCCATCCCTTGACAAAAAGGAAGAAATTTTTGAAAGCATATCTGTTGTTGCGGAGCTAGCTGGGCACTGCACTGCAAGAGAACCTAACCAACGACCAGATATGGGCCATGCAGTGAATGTCCTGGCCCCTCTTGTTGAAAAATGGAAACCCTTTGATGACGACACCGAGGAGTATTCTGGTATTGATTATAGCCTTCCCCTCAATCAGATGGTGAAGGGCTGGCAAGAGGCAGAAGGAAAGGATTTGAGCTATATGGACCTGGAAGACAGTAAGGGTAGCATCCCAGCAAGGCCTACTGGATTTGCAGATTCTTTTACTTCTGCTGATGGTCGCTAA 2877 0.4362 MKLAAAAMDERLLKLVSVLILSLAVVTFGVTDPNDVKILNQFRKGLDNPELLPWPVDGGDPCGNPPWKYIFCNGNRVSQIQTKNLNLSGPLPQNFNQLHMLERLGLQNNKLNGPLPSFSGLAKLQQAFLDYNDFDSIPADFFDGLVSLEVLALDYNNLNASTGWQFPPQLQDSSQLTNLSCMNCNLAGPLPSFLGNLSSLTVLKLSGNNLTGEIPATFNSTNLQVLWLNNPQGDGLTGPIDVVATMTSLTSLWLHGNKFTGTIPKNIGDLTSLKDLNLNGNQLVGLVPDALGKMKLDSLDLNNNHLMGPIPNFAAAKVTYDSNPFCQSKPGVPCSFEVMALLEFLDGLKYPLVLVNSWSTNDPCNGPWLGLKCDATGKVSMINLPKFNLNGTLSPSVANLGSLVEIRLGGNHLSGQIPSNWTSLNSLTLLDITDNNISPPLPHFSSKLKVVTDGNSLLNGNAESPSSGNSPSSGNSKPSHDTPSSPSTRTSPNSNSTSRSKNSNRKILFAIVAPVVGVAAAASLLIPLIYCYKRKKDSFQAPTSLVIHPRDPSDSDNTVKIAVANNTYGSMSTLTRSGSGSRNSSGIGESHVIEAGNLVISVQVLRNVTKNFAPENELGRGGFGVVYKGELDDGTKIAVKRMEAAMISNKALNEFQSEIAVLSKVRHRHLVSLLGYSIEGNERILVYEYMSQGALSQHLFHWKTFKLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKPSNILLGDDFRAKVSDFGLVKLAPDGEKSVETRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLTGLMALDEDRPEESQYLVAWFWHIKSDEEKFMAAIDPSLDKKEEIFESISVVAELAGHCTAREPNQRPDMGHAVNVLAPLVEKWKPFDDDTEEYSGIDYSLPLNQMVKGWQEAEGKDLSYMDLEDSKGSIPARPTGFADSFTSADGR 958
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g2155 958 FunFam receptor protein kinase TMK1 690 907 - -
Bisa03g2155 958 FunFam Receptor-like kinase TMK4 33 331 - -
Bisa03g2155 958 ProSiteProfiles Protein kinase domain profile. 612 892 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa03g2155 958 MobiDBLite consensus disorder prediction 935 958 - -
Bisa03g2155 958 FunFam receptor protein kinase TMK1 574 689 - -
Bisa03g2155 958 ProSitePatterns Protein kinases ATP-binding region signature. 618 640 IPR017441 GO:0005524
Bisa03g2155 958 PANTHER OSJNBA0070M12.3 PROTEIN 18 958 - -
Bisa03g2155 958 Pfam Leucine rich repeat N-terminal domain 33 73 IPR013210 -
Bisa03g2155 958 Pfam Leucine rich repeat N-terminal domain 338 374 IPR013210 -
Bisa03g2155 958 ProSitePatterns Serine/Threonine protein kinases active-site signature. 737 749 IPR008271 GO:0004672|GO:0006468
Bisa03g2155 958 Gene3D Transferase(Phosphotransferase) domain 1 690 908 - -
Bisa03g2155 958 FunFam Leucine-rich repeat receptor-like kinase 336 461 - -
Bisa03g2155 958 SMART serkin_6 612 892 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa03g2155 958 MobiDBLite consensus disorder prediction 455 501 - -
Bisa03g2155 958 Gene3D Ribonuclease Inhibitor 32 332 IPR032675 -
Bisa03g2155 958 SUPERFAMILY Protein kinase-like (PK-like) 589 895 IPR011009 -
Bisa03g2155 958 SMART LRR_typ_2 270 293 IPR003591 -
Bisa03g2155 958 SMART LRR_typ_2 98 120 IPR003591 -
Bisa03g2155 958 SMART LRR_typ_2 246 269 IPR003591 -
Bisa03g2155 958 SMART LRR_typ_2 121 144 IPR003591 -
Bisa03g2155 958 SMART LRR_typ_2 145 168 IPR003591 -
Bisa03g2155 958 SMART LRR_typ_2 400 424 IPR003591 -
Bisa03g2155 958 SMART LRR_typ_2 197 220 IPR003591 -
Bisa03g2155 958 Gene3D Ribonuclease Inhibitor 336 461 IPR032675 -
Bisa03g2155 958 Gene3D Phosphorylase Kinase; domain 1 575 689 - -
Bisa03g2155 958 Pfam Protein tyrosine and serine/threonine kinase 615 886 IPR001245 GO:0004672|GO:0006468
Bisa03g2155 958 CDD STKc_IRAK 618 891 - -
Bisa03g2155 958 Pfam Leucine rich repeat 248 306 IPR001611 GO:0005515
Bisa03g2155 958 SUPERFAMILY L domain-like 337 449 - -
Bisa03g2155 958 SUPERFAMILY L domain-like 31 315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g2155 Bisa-ChrBisa03 30867942 30871267 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g2155 87 925 Receptor kinase-like Gene Family AT1G55610 30.266 1.20e-83 291
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Bisa03g2155 PK_Tyr_Ser-Thr 9.4e-47 CL0016