Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g2123 ATGGGACGCGTCCGCACCAAAACTGTAAAGAAATCTTCGCGCCAAGTCATTGAGAAGTATTACTCTCGAATGACCCTCGATTTTCACACAAACAAGAAGATCCTTGAGGAGGTGGCTCTGATTCCCTCCAAGAGGCTCCGCAATAAGATTGCCGGATTTTCCACCCATCTCATGAAGAGGATCCAGAAGGGTCCCGTCCGCGGCATCTCCCTCAAGCTTCAGGAGGAGGAGCGCGAACGCAGAATGGATTTCGTGCCCGATGTTTCTGCGATCAAGACCGAGCAAATTGAGGTGGACAAGGAGACTCTTGACATGCTTAGCGCTCTTGGCATGAGCGAGATTCCTGGGCTTGTTCAGGTCGAGCCTGTTTCTGTTCAGCAGACGGTTGGATTCGGTCGTGGTGGTTTTGGAGCCGGGAGGAGGTTCTAA 429 0.5221 MGRVRTKTVKKSSRQVIEKYYSRMTLDFHTNKKILEEVALIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTEQIEVDKETLDMLSALGMSEIPGLVQVEPVSVQQTVGFGRGGFGAGRRF 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g2123 142 SUPERFAMILY Rps17e-like 1 62 IPR036401 GO:0003735|GO:0005840|GO:0006412
Bisa03g2123 142 FunFam 40S ribosomal protein S17 1 62 - -
Bisa03g2123 142 Hamap 30S ribosomal protein S17e [rps17e]. 1 63 IPR001210 GO:0003735|GO:0005840|GO:0006412
Bisa03g2123 142 Gene3D - 1 62 IPR036401 GO:0003735|GO:0005840|GO:0006412
Bisa03g2123 142 ProSitePatterns Ribosomal protein S17e signature. 41 56 IPR018273 GO:0003735|GO:0005840|GO:0006412
Bisa03g2123 142 PANTHER 40S RIBOSOMAL PROTEIN S17 1 126 IPR001210 GO:0003735|GO:0005840|GO:0006412
Bisa03g2123 142 Pfam Ribosomal S17 1 120 IPR001210 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g2123 Bisa-ChrBisa03 30394975 30395403 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g2123 1 140 Cytoplasmic Ribosomal Protein Gene Family AT5G04800 80.714 7.65e-79 228